RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 CFHR1Q03591 330 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 SQSTM1Q13501 440 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 SLC17A1Q14916 467 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 SGCBQ16585 318 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 C14orf28Q4W4Y0 310 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 RFPL4BQ6ZWI9 263 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 BPHLQ86WA6 291 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ZNF679Q8IYX0 411 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 UXS1Q8NBZ7 420 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 OR8S1Q8NH09 359 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 DUSP19Q8WTR2 217 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 LMAN1LQ9HAT1 526 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 C12orf10Q9HB07 376 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 COPS7AQ9UBW8 275 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 MTFP1Q9UDX5 166 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 TMED7Q9Y3B3 224 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 LMO7DNF2Z398 122 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ZNF217O75362 1048 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 IFNA7P01567 189 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 FREM3P0C091 2139 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 IFNGR1P15260 489 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 IL11P20809 199 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 FBLP22087 321 aaKnown RBP10.11□□□□□ -0.79
RPAIN-212ENST00000573126 NUDT1P36639 197 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 CSNK1EP49674 416 aaKnown RBP10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ARHGAP40Q5TG30 622 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ANKRD16Q6P6B7 361 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 NDUFAF7Q7L592 441 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 KRT77Q7Z794 578 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 CDH24Q86UP0 819 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 C17orf82Q86X59 251 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ADGRG3Q86Y34 549 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 OIT3Q8WWZ8 545 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 TTC9Q92623 222 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 DAZLQ92904 295 aaKnown RBP10.11□□□□□ -0.79
RPAIN-212ENST00000573126 DVL3Q92997 716 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ELMOD3Q96FG2 381 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ZNF587Q96SQ5 575 aaPredicted RBP10.11□□□□□ -0.79
RPAIN-212ENST00000573126 MNTQ99583 582 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 NPAS1Q99742 590 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 GINS4Q9BRT9 223 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 VN1R1Q9GZP7 353 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 ZNF304Q9HCX3 659 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 GLTPQ9NZD2 209 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 CTSFQ9UBX1 484 aa10.11□□□□□ -0.79
RPAIN-212ENST00000573126 RPS10-NUDT3A0A1W2PQS6 291 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 METTL12A8MUP2 240 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 PHYHO14832 338 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 SIX6O95475 246 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 VSIG10L2P0DP72 767 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 CPN1P15169 458 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 MNDAP41218 407 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 CSRP2Q16527 193 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 C2orf76Q3KRA6 126 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 C1orf140Q5VVS0 124 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 ZNF626Q68DY1 528 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 SLC18B1Q6NT16 456 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 SLC29A4Q7RTT9 530 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 NUP54Q7Z3B4 507 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 ANGPTL6Q8NI99 470 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 ZNF519Q8TB69 540 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 THAP3Q8WTV1 239 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-212ENST00000573126 FAM3DQ96BQ1 224 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 DPYSL5Q9BPU6 564 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 DIABLOQ9NR28 239 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 UBQLN2Q9UHD9 624 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 FBXL3Q9UKT7 428 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 CA14Q9ULX7 337 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 IGLV1-36A0A0B4J1U3 117 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 LINC00862A6NCI5 91 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 GTF2F2P13984 249 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 GLULP15104 373 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 HNRNPKP61978 463 aaKnown RBP eCLIP10.1□□□□□ -0.79
RPAIN-212ENST00000573126 EIF2B1Q14232 305 aaKnown RBP10.1□□□□□ -0.79
RPAIN-212ENST00000573126 RBMS2Q15434 407 aaKnown RBP10.1□□□□□ -0.79
RPAIN-212ENST00000573126 OR51S1Q8NGJ8 323 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 OR5M1Q8NGP8 315 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 OR1N1Q8NGS0 311 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 GPR119Q8TDV5 335 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 C15orf40Q8WUR7 153 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 ABHD6Q9BV23 337 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 TXNIPQ9H3M7 391 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 GPN1Q9HCN4 374 aaPredicted RBP10.1□□□□□ -0.79
RPAIN-212ENST00000573126 MYEF2Q9P2K5 600 aaKnown RBP10.1□□□□□ -0.79
RPAIN-212ENST00000573126 DHDHQ9UQ10 334 aa10.1□□□□□ -0.79
RPAIN-212ENST00000573126 IGHV1OR21-1A0A087WYE8 117 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 SLC22A23A1A5C7 686 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 ZSCAN5BA6NJL1 495 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 I3L521 148 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 SOX1O00570 391 aaPredicted RBP10.09□□□□□ -0.79
RPAIN-212ENST00000573126 EIF4E2O60573 245 aaKnown RBP10.09□□□□□ -0.79
RPAIN-212ENST00000573126 NPIPB7O75200 414 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 RGS11O94810 467 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 MT-ATP6P00846 226 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 CD3DP04234 171 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 CXCL2P19875 107 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 POLR2HP52434 150 aaKnown RBP10.09□□□□□ -0.79
RPAIN-212ENST00000573126 DCAF7P61962 342 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 FMODQ06828 376 aa10.09□□□□□ -0.79
RPAIN-212ENST00000573126 RAB11BQ15907 218 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms