RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ALKBH6Q3KRA9 238 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 NRN1LQ496H8 165 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 C16orf89Q6UX73 402 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 TMPRSS11FQ6ZWK6 438 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 DPPA2Q7Z7J5 298 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 NABP1Q96AH0 204 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 PYURFQ96I23 114 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 NSMCE2Q96MF7 247 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 FOXN4Q96NZ1 517 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 CCT8L2Q96SF2 557 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 PIMREGQ9BSJ6 248 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 ANKRD19PQ9H560 264 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 GORASP2Q9H8Y8 452 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 SIAEQ9HAT2 523 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 SMURF2Q9HAU4 748 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 MYEF2Q9P2K5 600 aaKnown RBP15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 GRHPRQ9UBQ7 328 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 CD300AQ9UGN4 299 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 IL20RAQ9UHF4 553 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 TMEM5Q9Y2B1 443 aa15.31■□□□□ 0.04
CTDNEP1-207ENST00000572043 A6NIZ1 184 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 CD5LO43866 347 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 ERCC1P07992 297 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 IGFBP1P08833 259 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 MMP7P09237 267 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 HSD17B1P14061 328 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 ZNF32P17041 273 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 APEX1P27695 318 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 LAP3P28838 519 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 RAP1BP61224 184 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 RAP1AP62834 184 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 SPIBQ01892 262 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 LOXL1Q08397 574 aaPredicted RBP15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 TBC1D28Q2M2D7 210 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 TMEM249Q2WGJ8 235 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 PABPC1L2AQ5JQF8 200 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 THEM4Q5T1C6 240 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 FAM205BPQ63HN1 556 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 ARIH2OSQ8N7S6 290 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 CPEB3Q8NE35 698 aaKnown RBP15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 AKR7LQ8NHP1 331 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 Q96M85 177 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 REV1Q9UBZ9 1251 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 ADAM21Q9UKJ8 722 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 AURKCQ9UQB9 309 aa15.3■□□□□ 0.04
CTDNEP1-207ENST00000572043 TEX13CA0A0J9YWL9 993 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 A0A1W2PPW3 197 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 M0R233 179 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 LCKP06239 509 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 CD14P08571 375 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 DAOP14920 347 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 USF1P22415 310 aaPredicted RBP15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 APLNRP35414 380 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 OMPP47874 163 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 LIMS1P48059 325 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 RPS23P62266 143 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 KRTAP21-3Q3LHN1 58 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 ANKDD1AQ495B1 522 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 IQCCQ4KMZ1 466 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 MESTQ5EB52 335 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 RGS7BPQ6MZT1 257 aaPredicted RBP15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 FITM2Q8N6M3 262 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 MCUR1Q96AQ8 359 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 RASD2Q96D21 266 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 RSRC1Q96IZ7 334 aaKnown RBP15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 ZNF570Q96NI8 536 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 NDEL1Q9GZM8 345 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 RERGLQ9H628 205 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 MTORP42345 2549 aa15.29■□□□□ 0.04
CTDNEP1-207ENST00000572043 C2CD3Q4AC94 2353 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 LOC390937A0A1W2PQ73 354 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 LYNX1G3V0Z9 82 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 XKRYO14609 159 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 SYNGR3O43761 229 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 MGRN1O60291 552 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 PTHP01270 115 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 SEMG1P04279 462 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 LYNX1P0DP58 116 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 ITGA2P17301 1181 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 GUCA1AP43080 201 aaPredicted RBP15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 NR4A2P43354 598 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 OTPQ5XKR4 325 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 CYP2R1Q6VVX0 501 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 THSD4Q6ZMP0 1018 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 OR1J2Q8NGS2 313 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 NEU4Q8WWR8 484 aaPredicted RBP15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 GPA33Q99795 319 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 BPESC1Q9GZL8 116 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 LRMDAQ9H2I8 198 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 C1orf198Q9H425 327 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 KRCC1Q9NPI7 259 aaPredicted RBP15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 NDE1Q9NXR1 346 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 FBXO9Q9UK97 447 aaPredicted RBP15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 SIGLEC7Q9Y286 467 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 ZFHX3Q15911 3703 aa15.28■□□□□ 0.04
CTDNEP1-207ENST00000572043 IGHV4-61A0A0C4DH41 118 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 SLC22A23A1A5C7 686 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 UNC119BA6NIH7 251 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 B2RBV5 119 aa15.27■□□□□ 0.04
CTDNEP1-207ENST00000572043 VWC2LB2RUY7 222 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms