RNA–Protein interactions for RNA: ENST00000568676.5

HERPUD1-215, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 571 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-215ENST00000568676 MRPS34P82930 218 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 MELKQ14680 651 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 ARMCX4Q5H9R4 360 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 C10orf128Q5T292 105 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 BLOC1S3Q6QNY0 202 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 TREML4Q6UXN2 200 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 MSRB3Q8IXL7 192 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 LRRC58Q96CX6 371 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 MRPL13Q9BYD1 178 aaKnown RBP13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 SIAEQ9HAT2 523 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 SMURF2Q9HAU4 748 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 CCNB1IP1Q9NPC3 277 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 VAPAQ9P0L0 249 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 CACNG2Q9Y698 323 aa13.35□□□□□ -0.27
HERPUD1-215ENST00000568676 TRBV5-3A0A0A0MS03 114 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 A0A1W2PRG6 482 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 GMNCA6NCL1 334 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 CLDN34H7C241 214 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 ICMTO60725 284 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 CD55P08174 381 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 MAKP20794 623 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 DAP3P51398 398 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 ENTPD8Q5MY95 495 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 MAVSQ7Z434 540 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 NANOGNBQ7Z5D8 188 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 ZER1Q7Z7L7 766 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 SPICQ8N5J4 248 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 SIGLECL1Q8N7X8 197 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 NOXO1Q8NFA2 376 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 ADAMTS16Q8TE57 1224 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 C22orf15Q8WYQ4 148 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 SLC25A28Q96A46 364 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 SPDL1Q96EA4 605 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 MARS2Q96GW9 593 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 ARHGDIGQ99819 225 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 ZNF426Q9BUY5 554 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 SLITRK2Q9H156 845 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 UBAP1Q9NZ09 502 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 LEF1Q9UJU2 399 aaPredicted RBP13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 PURGQ9UJV8 347 aaKnown RBP13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 AUP1Q9Y679 476 aa13.34□□□□□ -0.27
HERPUD1-215ENST00000568676 TRAPPC13A5PLN9 417 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 DNAJC9-AS1A6NH13 148 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 MCIDASD6RGH6 385 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 SPRY3O43610 288 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 TGDSO95455 350 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 IGHMP01871 453 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 RNASE1P07998 156 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 UMPSP11172 480 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 CCNOP22674 350 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 CPT2P23786 658 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 AQP1P29972 269 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 PCBP3P57721 371 aaKnown RBP13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 GLO1Q04760 184 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 OCLNQ16625 522 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 TMEM155Q4W5P6 130 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 PABPC1L2AQ5JQF8 200 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 EPGNQ6UW88 154 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 SLC30A8Q8IWU4 369 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 C10orf111Q8N326 155 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 LRRC18Q8N456 261 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 KLHL36Q8N4N3 616 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 C11orf65Q8NCR3 313 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 DEFB108BQ8NET1 73 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 KLF14Q8TD94 323 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 IPCEF1Q8WWN9 437 aaPredicted RBP13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 POM121L2Q96KW2 1035 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 WFDC6Q9BQY6 131 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 MRI1Q9BV20 369 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 PCDHAC1Q9H158 963 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 NKIRAS1Q9NYS0 192 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 SLAMF8Q9P0V8 285 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 NPTNQ9Y639 398 aa13.33□□□□□ -0.28
HERPUD1-215ENST00000568676 NPIPB13A6NJU9 1138 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 CPSF4LA6NMK7 179 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 NPIPB4C9JG80 1138 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 M0R3H8 397 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 IGF2P01344 180 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 ACADSP16219 412 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 TUBG1P23258 451 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 GDI2P50395 445 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 ZNF154Q13106 437 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 BAMBIQ13145 260 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 NPTX1Q15818 432 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 DUSP7Q16829 419 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 THEM4Q5T1C6 240 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 ARL9Q6T311 187 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 FUNDC1Q8IVP5 155 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 ALDH16A1Q8IZ83 802 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 ZNF101Q8IZC7 436 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 SMYD1Q8NB12 490 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 OR6T1Q8NGN1 323 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 GTF3AQ92664 365 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 ZNF347Q96SE7 839 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 UNKLQ9H9P5 680 aaKnown RBP13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 ELOVL3Q9HB03 270 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 TUBG2Q9NRH3 451 aa13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.32□□□□□ -0.28
HERPUD1-215ENST00000568676 KLHL21Q9UJP4 597 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms