RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 ART3Q13508 389 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 ELAVL3Q14576 367 aaKnown RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 PON2Q15165 354 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CYTH1Q15438 398 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 MAPK6Q16659 721 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 KLHL12Q53G59 568 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 HSP90AA4PQ58FG1 418 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 YIF1BQ5BJH7 314 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 TMEM31Q5JXX7 168 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 BRMS1LQ5PSV4 323 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 C1orf146Q5VVC0 180 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CLEC2AQ6UVW9 174 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 HSD17B13Q7Z5P4 300 aaPredicted RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 ANKRD37Q7Z713 158 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 MMAAQ8IVH4 418 aaKnown RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 ATP6V0D2Q8N8Y2 350 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 ZSCAN4Q8NAM6 433 aaPredicted RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 MCOLN3Q8TDD5 553 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 GIPC3Q8TF64 312 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 SETD7Q8WTS6 366 aaKnown RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 CEMIPQ8WUJ3 1361 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 RNF138Q8WVD3 245 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 LINC00167Q96N53 147 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 QKIQ96PU8 341 aaKnown RBP eCLIP2.55□□□□□ -2
HERPUD1-212ENST00000567944 VPS35Q96QK1 796 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CITED1Q99966 193 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CNPY3Q9BT09 278 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 KIFC1Q9BW19 673 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CHID1Q9BWS9 393 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CALN1Q9BXU9 219 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CHIAQ9BZP6 476 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CCDC90BQ9GZT6 254 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 SAV1Q9H4B6 383 aaPredicted RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 EXO5Q9H790 373 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 VAT1LQ9HCJ6 419 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 SLC40A1Q9NP59 571 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 TREM1Q9NP99 234 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CHRAC1Q9NRG0 131 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 TMOD2Q9NZR1 351 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 WRAP73Q9P2S5 460 aaPredicted RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 PSMC3IPQ9P2W1 217 aaPredicted RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 ANAPC7Q9UJX3 599 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 STOML2Q9UJZ1 356 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 RPL26L1Q9UNX3 145 aaKnown RBP2.55□□□□□ -2
HERPUD1-212ENST00000567944 MGAT4BQ9UQ53 548 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 SPACA6W5XKT8 324 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 CDH23Q9H251 3354 aa2.55□□□□□ -2
HERPUD1-212ENST00000567944 LRRK1Q38SD2 2015 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 ABCC12Q96J65 1359 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 PHLPP2Q6ZVD8 1323 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 A0A075B6Q4 140 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 IGHV1OR15-1A0A075B7D0 117 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 A0A0A6YYH2 397 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.54□□□□□ -2
HERPUD1-212ENST00000567944 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.54□□□□□ -2
HERPUD1-212ENST00000567944 A6NJ64 397 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 F8WDY8 70 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 SLC9A3R1O14745 358 aaPredicted RBP2.54□□□□□ -2
HERPUD1-212ENST00000567944 POLR1CO15160 346 aaPredicted RBP2.54□□□□□ -2
HERPUD1-212ENST00000567944 NDUFA2O43678 99 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 VPS26AO75436 327 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 SERPINB7O75635 380 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 B3GAT3O94766 335 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 CDK14O94921 469 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 CCNB2O95067 398 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 NSA2O95478 260 aaKnown RBP2.54□□□□□ -2
HERPUD1-212ENST00000567944 DHFRP00374 187 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 AGTP01019 485 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 IGHV3-48P01763 117 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 IGF1P05019 195 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 FGF4P08620 206 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 HBQ1P09105 142 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 OR8U8P0C7N1 319 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 FAM228BP0C875 321 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 MX1P20591 662 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 CYP2B6P20813 491 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 VDAC1P21796 283 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 CD1BP29016 333 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 CD79BP40259 229 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 KIR2DS2P43631 304 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 GNPDA1P46926 289 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 SLC26A2P50443 739 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 AP2S1P53680 142 aaPredicted RBP2.54□□□□□ -2
HERPUD1-212ENST00000567944 WNT4P56705 351 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 ZNF45Q02386 682 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 HSF2Q03933 536 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 XRCC4Q13426 336 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 IL18Q14116 193 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 TRIP10Q15642 601 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 SSX2Q16385 188 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 KRTAP13-3Q3SY46 172 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 CELF3Q5SZQ8 465 aaKnown RBP2.54□□□□□ -2
HERPUD1-212ENST00000567944 METTL21CQ5VZV1 264 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 ELP2Q6IA86 826 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 PYHIN1Q6K0P9 492 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 C1orf94Q6P1W5 598 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 NIPAL3Q6P499 406 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 FAM122BQ7Z309 247 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 SMIM15Q7Z3B0 74 aa2.54□□□□□ -2
HERPUD1-212ENST00000567944 DCXRQ7Z4W1 244 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms