RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 LINC00114Q6XXX2 140 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 RFPL4BQ6ZWI9 263 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 JAZF1Q86VZ6 243 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 ARMC8Q8IUR7 673 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 BHLHE22Q8NFJ8 381 aaPredicted RBP13.09□□□□□ -0.31
PALB2-205ENST00000567003 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 AKR7LQ8NHP1 331 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 ST7LQ8TDW4 575 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 MCHR2Q969V1 340 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 VAPAQ9P0L0 249 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 PURGQ9UJV8 347 aaKnown RBP13.09□□□□□ -0.31
PALB2-205ENST00000567003 NUP50Q9UKX7 468 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 WNK1Q9H4A3 2382 aa13.09□□□□□ -0.31
PALB2-205ENST00000567003 IGHG1P01857 330 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 LRIF1Q5T3J3 769 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 SWT1Q5T5J6 900 aaKnown RBP13.08□□□□□ -0.32
PALB2-205ENST00000567003 TREML1Q86YW5 311 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 FUNDC1Q8IVP5 155 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 MREGQ8N565 214 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 NOXO1Q8NFA2 376 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 GPR32P1Q8NGA4 272 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 OR6T1Q8NGN1 323 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 SLC25A40Q8TBP6 338 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 MARS2Q96GW9 593 aaKnown RBP13.08□□□□□ -0.32
PALB2-205ENST00000567003 ZNF607Q96SK3 696 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 ARHGDIGQ99819 225 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 OR2J1Q9GZK6 312 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 LRMDAQ9H2I8 198 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 NANSQ9NR45 359 aa13.08□□□□□ -0.32
PALB2-205ENST00000567003 LOC100509620A0A075B734 347 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 PRORSD1PA6NEY8 169 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 CHP2O43745 196 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 ENTPD5O75356 428 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 FOXH1O75593 365 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 SLC2A10O95528 541 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 PTHP01270 115 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 IGHV2-70P01814 119 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 SBK2P0C263 348 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 UMPSP11172 480 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 ZNF32P17041 273 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 MDKP21741 143 aaPredicted RBP13.07□□□□□ -0.32
PALB2-205ENST00000567003 SLC6A2P23975 617 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 STOMP27105 288 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 GCH1P30793 250 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 ATP4BP51164 291 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 ZNF154Q13106 437 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 MOGQ16653 247 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 ZNF718Q3SXZ3 478 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 ENTPD8Q5MY95 495 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 LEG1Q6P5S2 330 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 ZNF613Q6PF04 617 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 VANGL1Q8TAA9 524 aaPredicted RBP13.07□□□□□ -0.32
PALB2-205ENST00000567003 KLF14Q8TD94 323 aaPredicted RBP13.07□□□□□ -0.32
PALB2-205ENST00000567003 POP5Q969H6 163 aaKnown RBP13.07□□□□□ -0.32
PALB2-205ENST00000567003 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
PALB2-205ENST00000567003 MSL2Q9HCI7 577 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 SLCO1B3Q9NPD5 702 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 PLEK2Q9NYT0 353 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 EGFL7Q9UHF1 273 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 NPTNQ9Y639 398 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 AUP1Q9Y679 476 aa13.07□□□□□ -0.32
PALB2-205ENST00000567003 TRBV5-3A0A0A0MS03 114 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 IGKV1D-43A0A0B4J1Z2 117 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 PLSCR5A0PG75 271 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 TMEM120BA0PK00 339 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 C5orf49A4QMS7 147 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 MGRN1O60291 552 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 TRMUO75648 421 aaKnown RBP13.06□□□□□ -0.32
PALB2-205ENST00000567003 IGHMP01871 453 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 F13BP05160 661 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 RNASE1P07998 156 aaKnown RBP13.06□□□□□ -0.32
PALB2-205ENST00000567003 IGHV4-38-2P0DP08 117 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 OMGP23515 440 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 ZNF84P51523 738 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 FMODQ06828 376 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 SRSF4Q08170 494 aaKnown RBP13.06□□□□□ -0.32
PALB2-205ENST00000567003 SLC9A3R2Q15599 337 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 HIST3H3Q16695 136 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 DUSP7Q16829 419 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 TTC33Q6PID6 262 aaPredicted RBP13.06□□□□□ -0.32
PALB2-205ENST00000567003 NANOGNBQ7Z5D8 188 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 DPPA2Q7Z7J5 298 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 HIPK4Q8NE63 616 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 ABHD4Q8TB40 342 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 ASB10Q8WXI3 467 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 NABP1Q96AH0 204 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 POM121L2Q96KW2 1035 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 EGLN1Q9GZT9 426 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 TMEM38AQ9H6F2 299 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 CCNB1IP1Q9NPC3 277 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.06□□□□□ -0.32
PALB2-205ENST00000567003 ZNF229Q9UJW7 825 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 SLC7A7Q9UM01 511 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 UGT2A1Q9Y4X1 527 aa13.06□□□□□ -0.32
PALB2-205ENST00000567003 MDFIC2A0A1B0GVS7 189 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 MCIDASD6RGH6 385 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 BLOC1S5-TXNDC5H3BN57 136 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 SERPINB7O75635 380 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 GPANK1O95872 356 aa13.05□□□□□ -0.32
PALB2-205ENST00000567003 NGFP01138 241 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms