RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 KRT77Q7Z794 578 aa12.87□□□□□ -0.35
CDH1-209ENST00000566510 FAM160A2Q8N612 972 aaPredicted RBP12.87□□□□□ -0.35
CDH1-209ENST00000566510 OR6N1Q8NGY5 312 aa12.87□□□□□ -0.35
CDH1-209ENST00000566510 MCHR2Q969V1 340 aa12.87□□□□□ -0.35
CDH1-209ENST00000566510 GMEB2Q9UKD1 530 aa12.87□□□□□ -0.35
CDH1-209ENST00000566510 KCNMB2Q9Y691 235 aa12.87□□□□□ -0.35
CDH1-209ENST00000566510 TCRBV16S1A1N1A0A5B0 115 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 TXNDC12O95881 172 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 CLPSP04118 112 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 IGHV4-34P06331 123 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 NDUFAF7Q7L592 441 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 MARCH3Q86UD3 253 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 ZSCAN1Q8NBB4 408 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 PTPMT1Q8WUK0 201 aaPredicted RBP12.86□□□□□ -0.35
CDH1-209ENST00000566510 LIPHQ8WWY8 451 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 TCTN2Q96GX1 697 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 POFUT1Q9H488 388 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 DHDHQ9UQ10 334 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 PRELID1Q9Y255 219 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 SLCO1B1Q9Y6L6 691 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 PCDH15Q96QU1 1955 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 LOC100289279A0A1B0GTE1 492 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 DCDC2BA2VCK2 349 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 MFSD2BA6NFX1 497 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 TUBAL3A6NHL2 446 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 M0QYG6 137 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 IL33O95760 270 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 PNPP00491 289 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 CSN2P05814 226 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 PPP3CBP16298 524 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 CD1CP29017 333 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 OR1D4P47884 311 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 MECP2P51608 486 aaKnown RBP12.86□□□□□ -0.35
CDH1-209ENST00000566510 SLC37A1P57057 533 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 ADAM8P78325 824 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 ZNF117Q03924 483 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 HYAL1Q12794 435 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 GK2Q14410 553 aaPredicted RBP12.86□□□□□ -0.35
CDH1-209ENST00000566510 ETFDHQ16134 617 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 RGS7BPQ6MZT1 257 aaPredicted RBP12.86□□□□□ -0.35
CDH1-209ENST00000566510 MDGA2Q7Z553 956 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 SCARB1Q8WTV0 552 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 APMAPQ9HDC9 416 aa12.86□□□□□ -0.35
CDH1-209ENST00000566510 FARSAQ9Y285 508 aaKnown RBP12.86□□□□□ -0.35
CDH1-209ENST00000566510 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 WISP1O95388 367 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 GABRA1P14867 456 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 ZP3P21754 424 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 IL12BP29460 328 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 DLX2Q07687 328 aaPredicted RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 DMWDQ09019 674 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 SLC17A1Q14916 467 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 GLYATL3Q5SZD4 288 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 TMEM151BQ8IW70 566 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 PRSS58Q8IYP2 241 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 OR6M1Q8NGM8 313 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 TOE1Q96GM8 510 aaKnown RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 CCNL2Q96S94 520 aaPredicted RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 MS4A7Q9GZW8 240 aaPredicted RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 MFFQ9GZY8 342 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 CKLFQ9UBR5 152 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 CGGBP1Q9UFW8 167 aaPredicted RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 FBXL2Q9UKC9 423 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 NUP210LQ5VU65 1888 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 TMEM272A0A1B0GTI8 110 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 HMSDA8MTL9 139 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 HOXD4P09016 255 aaPredicted RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 CSRP1P21291 193 aaKnown RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 RORAP35398 523 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 PPICP45877 212 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 SERTAD2Q14140 314 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 ACKR1Q16570 336 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 SCGB2B2Q4G0G5 96 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 TMEM205Q6UW68 189 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 DNM1P46Q6ZS02 220 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 TTLL10Q6ZVT0 673 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 ZBTB44Q8NCP5 570 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 OR1J4Q8NGS1 313 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 TSLPQ969D9 159 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 NKD1Q969G9 470 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 MNTQ99583 582 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
CDH1-209ENST00000566510 SLC38A3Q99624 504 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 B9D1Q9UPM9 204 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 WDR87Q6ZQQ6 2873 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 LOC100509620A0A075B734 347 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 BLACEA4D250 179 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 SLC17A2O00624 439 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 PHYHO14832 338 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 RAB3DO95716 219 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 DRD1P21728 446 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 GFERP55789 205 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 ZP2Q05996 745 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 SLC18B1Q6NT16 456 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 TMEM81Q6P7N7 255 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 ZNF679Q8IYX0 411 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 GABRG1Q8N1C3 465 aa12.85□□□□□ -0.35
CDH1-209ENST00000566510 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms