RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 FILIP1LQ4L180 1135 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 LINC00483Q53H64 154 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TEX44Q53QW1 395 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 C5orf47Q569G3 176 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CT45A2Q5DJT8 189 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ZNF789Q5FWF6 425 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 FBXO48Q5FWF7 155 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD20A2Q5SQ80 823 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD20A1Q5TYW2 823 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD20A3Q5VUR7 823 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SPECC1LQ69YQ0 1117 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 RAET1GQ6H3X3 334 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 NEK5Q6P3R8 708 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 KDELC1Q6UW63 502 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ARSKQ6UWY0 536 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 FAM151BQ6UXP7 276 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 WASH2PQ6VEQ5 465 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 BRD3OSQ6XYD6 125 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 H2AFVQ71UI9 128 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ARCQ7LC44 396 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SPATA19Q7Z5L4 167 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 RABEPKQ7Z6M1 372 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 HMGN2P46Q86SG4 172 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CTAGE6Q86UF2 777 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 GKN2Q86XP6 184 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 VSTM4Q8IW00 320 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PIANPQ8IYJ0 282 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 PRSS58Q8IYP2 241 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 KRT222Q8N1A0 295 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ATPAF2Q8N5M1 289 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CATSPER1Q8NEC5 780 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ANKRD20A12PQ8NF67 263 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 IPMKQ8NFU5 416 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 OR4K2Q8NGD2 314 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 OR56A4Q8NGH8 313 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 OR5AR1Q8NGP9 310 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 OR9A1PQ8NGU1 263 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 OR10G6Q8NH81 332 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 WDR36Q8NI36 951 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 KIF18AQ8NI77 898 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 GDAP1Q8TB36 358 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 RDH11Q8TC12 318 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ACTL9Q8TC94 416 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CTNNBL1Q8WYA6 563 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 UCN3Q969E3 161 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 NTAN1Q96AB6 310 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 VPS33AQ96AX1 596 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ECHDC3Q96DC8 303 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 DTD2Q96FN9 168 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 IMP4Q96G21 291 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 COX14Q96I36 57 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 LINC00477Q96M19 166 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CCDC42Q96M95 316 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 ZNF641Q96N77 438 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 PSKH2Q96QS6 385 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TRIB3Q96RU7 358 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CCNL2Q96S94 520 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 INTS14Q96SY0 518 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 BPIFA3Q9BQP9 254 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TMEM121Q9BTD3 319 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 MLPHQ9BV36 600 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 FICDQ9BVA6 458 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TM2D1Q9BX74 207 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 AP1M1Q9BXS5 423 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 NAT10Q9H0A0 1025 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 SLC25A51Q9H1U9 297 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 DCLRE1BQ9H816 532 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 LIN28AQ9H9Z2 209 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 FAM60AQ9NP50 221 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 NRN1Q9NPD7 142 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 CHRAC1Q9NRG0 131 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 HRASLS2Q9NWW9 162 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SLC39A1Q9NY26 324 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 DNAJB9Q9UBS3 223 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 MRTO4Q9UKD2 239 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 DNPEPQ9ULA0 475 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 GUCA1BQ9UMX6 200 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SCML1Q9UN30 329 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 SLC17A4Q9Y2C5 497 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TDRKHQ9Y2W6 561 aaKnown RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 MUC22E2RYF6 1773 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 ZNF462Q96JM2 2506 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 TEX15Q9BXT5 2789 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 NAV2Q8IVL1 2488 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 DNAJC13O75165 2243 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 HECTD1Q9ULT8 2610 aa0.97□□□□□ -2.25
SMG1-212ENST00000566328 COL27A1Q8IZC6 1860 aaPredicted RBP0.97□□□□□ -2.25
SMG1-212ENST00000566328 UBR5O95071 2799 aaPredicted RBP0.96□□□□□ -2.25
SMG1-212ENST00000566328 PKDREJQ9NTG1 2253 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 OTOGQ6ZRI0 2925 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 HEATR5AQ86XA9 2040 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CACNA1CQ13936 2221 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 ZNF407Q9C0G0 2248 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 CREBBPQ92793 2442 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 SHANK1Q9Y566 2161 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 PDZD2O15018 2839 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 POLQO75417 2590 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 LRP4O75096 1905 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 hCG_1818297A0A087WSY0 165 aa0.96□□□□□ -2.26
SMG1-212ENST00000566328 A0A087X0K7 114 aa0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms