RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 ZNF672Q499Z4 452 aaPredicted RBP18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 CLEC12AQ5QGZ9 265 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 FAM27BQ5VT28 67 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 HS3ST5Q8IZT8 346 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 KBTBD8Q8NFY9 601 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 OR5K1Q8NHB7 308 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 NSMAFQ92636 917 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 NRGNQ92686 78 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 ZNF75AQ96N20 296 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 REV1Q9UBZ9 1251 aa18.33■□□□□ 0.53
SHCBP1-205ENST00000566016 SOX14O95416 240 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 RAF1P04049 648 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 CECR9P0C854 216 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 CD79AP11912 226 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 HIST1H1CP16403 213 aaKnown RBP18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 CTLA4P16410 223 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 GUCA1AP43080 201 aaPredicted RBP18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 SLC36A2Q495M3 483 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 FAHD1Q6P587 224 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 JAZF1Q86VZ6 243 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 HIPK1Q86Z02 1210 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 DEPDC4Q8N2C3 294 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 ZNF611Q8N823 705 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 IL17RDQ8NFM7 739 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 OR2T33Q8NG76 320 aa18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 LILRB1Q8NHL6 650 aaPredicted RBP18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 AKAP1Q92667 903 aaKnown RBP eCLIP18.33■□□□□ 0.52
SHCBP1-205ENST00000566016 MAP1AP78559 2803 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 CRYAAP02489 173 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 ZNF14P17017 642 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 CRABP1P29762 137 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 CDAP32320 146 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 IDH3GP51553 393 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 RAB1AP62820 205 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 NAAAQ02083 359 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 SPOCK1Q08629 439 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 DNM1P34Q6PK57 102 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 SLC22A25Q6T423 547 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 SLC16A14Q7RTX9 510 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 SVOPLQ8N434 492 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 TEX47Q8TBZ9 253 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 PYDC1Q8WXC3 89 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 FBXW5Q969U6 566 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 CENPNQ96H22 339 aaPredicted RBP18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 SH3GL3Q99963 347 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 TSSK6Q9BXA6 273 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 LIME1Q9H400 295 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 UBTD1Q9HAC8 227 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 NOX3Q9HBY0 568 aa18.32■□□□□ 0.52
SHCBP1-205ENST00000566016 RAB36O95755 333 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 RENP00797 406 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 MSR1P21757 451 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 GIPRP48546 466 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 CDH11P55287 796 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 NPRL3Q12980 569 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 SLC36A3Q495N2 470 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 ZDHHC13Q8IUH4 622 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 ATG16L2Q8NAA4 619 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 OR4K13Q8NH42 304 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 LRTOMTQ8WZ04 291 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 MBD6Q96DN6 1003 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 NMNAT3Q96T66 252 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 WACQ9BTA9 647 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 NUAK2Q9H093 628 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 RACGAP1Q9H0H5 632 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 GABARAPL1Q9H0R8 117 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 POLE4Q9NR33 117 aa18.31■□□□□ 0.52
SHCBP1-205ENST00000566016 G3V2T6 193 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 SLC16A7O60669 478 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 TMCC2O75069 709 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 KHDRBS3O75525 346 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 ATE1O95260 518 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 CST2P09228 141 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 MMP7P09237 267 aaPredicted RBP18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 OSMP13725 252 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 PRKACGP22612 351 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 PTDSS1P48651 473 aaKnown RBP18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 PIGFQ07326 219 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 TMEM53Q6P2H8 277 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 LEG1Q6P5S2 330 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 MYPOPQ86VE0 399 aaPredicted RBP18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 GLB1L2Q8IW92 636 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 PARP8Q8N3A8 854 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 NPEPL1Q8NDH3 523 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 HTRA1Q92743 480 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 KCNS3Q9BQ31 491 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 KCNN2Q9H2S1 579 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 C1orf198Q9H425 327 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 KIF17Q9P2E2 1029 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 FKBP7Q9Y680 259 aa18.3■□□□□ 0.52
SHCBP1-205ENST00000566016 A0A1W2PPL8 197 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 H3BN98 237 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 H3BNX3 289 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 SERPINA5P05154 406 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 IGFBP1P08833 259 aaPredicted RBP18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 CELA3BP08861 270 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 DNASE1P24855 282 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 LAP3P28838 519 aa18.29■□□□□ 0.52
SHCBP1-205ENST00000566016 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms