RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 BMFQ96LC9 184 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 C17orf77Q96MU5 243 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF385AQ96PM9 386 aaKnown RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 COPS8Q99627 209 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 INPP5KQ9BT40 448 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 MARCH7Q9H992 704 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 CHST11Q9NPF2 352 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 DDX28Q9NUL7 540 aaKnown RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 EXD2Q9NVH0 621 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 NDUFB11Q9NX14 153 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 RABL2AQ9UBK7 228 aaPredicted RBP3.69□□□□□ -1.82
LINC00561-201ENST00000565815 RABL2BQ9UNT1 228 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 ENPP4Q9Y6X5 453 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 U3KQV3 271 aa3.69□□□□□ -1.82
LINC00561-201ENST00000565815 NAV2Q8IVL1 2488 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 DSPPQ9NZW4 1301 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 A0A0D9SEW6 157 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 A0A1B0GUH1 482 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 hCG_2039718K7EN88 272 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 FOXE1O00358 373 aaPredicted RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 FAAHO00519 579 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 GAPDHSO14556 408 aaPredicted RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SLC31A1O15431 190 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CIDEAO60543 219 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 PRSS56P0CW18 603 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TCEA1P23193 301 aaKnown RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ALDH4A1P30038 563 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 XCR1P46094 333 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 RGRP47804 291 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 PGFP49763 221 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CRISP1P54107 249 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 DCDC1P59894 354 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 PSPHP78330 225 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CD300CQ08708 224 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 C17orf67Q0P5P2 114 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TNK1Q13470 666 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 PDE7AQ13946 482 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 C14orf28Q4W4Y0 310 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 KLHL22Q53GT1 634 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 YIF1BQ5BJH7 314 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 WDR38Q5JTN6 314 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 DDI2Q5TDH0 399 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 C9orf139Q6ZV77 190 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CACUL1Q86Y37 369 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 C9orf106Q8NAJ2 232 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 OR8J1Q8NGP2 316 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ZFAND1Q8TCF1 268 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SLC7A6Q92536 515 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ESAMQ96AP7 390 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 WDR34Q96EX3 536 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ST6GAL2Q96JF0 529 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TSSK3Q96PN8 268 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 FEVQ99581 238 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SRRQ9GZT4 340 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SLC25A19Q9HC21 320 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SERINC1Q9NRX5 453 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 QPCTLQ9NXS2 382 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SLC39A1Q9NY26 324 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF226Q9NYT6 803 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 STMN3Q9NZ72 180 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CLEC4EQ9ULY5 219 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 HS3ST2Q9Y278 367 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 WDR83OSQ9Y284 106 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 MAST4O15021 2626 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CABIN1Q9Y6J0 2220 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 MEIOCA2RUB1 952 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 C21orf140B9A014 251 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ST8SIA3O43173 380 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 BUB3O43684 328 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 PRKYO43930 277 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 GUCA1CO95843 209 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TSHBP01222 138 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 PTHP01270 115 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 IFNW1P05000 195 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF30P17039 623 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 EPORP19235 508 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CXCR2P25025 360 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 TIA1P31483 386 aaKnown RBP eCLIP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SDC2P34741 201 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 CDKN2CP42773 168 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SLC9A3P48764 834 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 KIAA1024LP59773 190 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 BTG1P62324 171 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ARF5P84085 180 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 SPIBQ01892 262 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 IRF8Q02556 426 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 HSPB3Q12988 150 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 QPRTQ15274 297 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 DEFB133Q30KQ1 61 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 ZNF718Q3SXZ3 478 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 GPAT3Q53EU6 434 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 LCN1P1Q5VSP4 162 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 C12orf73Q69YU5 71 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 MFSD12Q6NUT3 480 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 KRT77Q7Z794 578 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 VASH2Q86V25 355 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 FAM83FQ8NEG4 500 aaPredicted RBP3.68□□□□□ -1.82
LINC00561-201ENST00000565815 DUSP18Q8NEJ0 188 aa3.68□□□□□ -1.82
LINC00561-201ENST00000565815 B3GNT7Q8NFL0 401 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms