RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 GNAO1P09471 354 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 ZNF32P17041 273 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 NAA10P41227 235 aaPredicted RBP2.78□□□□□ -1.96
CHD9-215ENST00000565442 RPS9P46781 194 aaKnown RBP2.78□□□□□ -1.96
CHD9-215ENST00000565442 CYB561P49447 251 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 SSR4P51571 173 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 BEX3Q00994 111 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 KCTD19Q17RG1 926 aaPredicted RBP2.78□□□□□ -1.96
CHD9-215ENST00000565442 LY6G6FQ5SQ64 297 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 RAET1LQ5VY80 246 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 SPECC1LQ69YQ0 1117 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 OAFQ86UD1 273 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 CTAGE6Q86UF2 777 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 PCP2Q8IVA1 136 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 FBXL13Q8NEE6 735 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 ACMSDQ8TDX5 336 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 ELMO1Q92556 727 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 FAM3DQ96BQ1 224 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 MRPL37Q9BZE1 423 aaKnown RBP2.78□□□□□ -1.96
CHD9-215ENST00000565442 FAM192AQ9GZU8 254 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 IFI27L2Q9H2X8 130 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 VCXQ9H320 206 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 OR51M1Q9H341 326 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 MYOZ2Q9NPC6 264 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 PITPNC1Q9UKF7 332 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 GOLT1BQ9Y3E0 138 aa2.78□□□□□ -1.96
CHD9-215ENST00000565442 USP47Q96K76 1375 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 TRAV39A0A0B4J263 110 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 AIM2O14862 343 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 MRPS12O15235 138 aaKnown RBP2.77□□□□□ -1.97
CHD9-215ENST00000565442 DPM1O60762 260 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 CLPXO76031 633 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 FABP3P05413 133 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 PRPS2P11908 318 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 ZNF250P15622 560 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 OMGP23515 440 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 MAS1LP35410 378 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 LONP1P36776 959 aaKnown RBP2.77□□□□□ -1.97
CHD9-215ENST00000565442 AQP2P41181 271 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 TWF1Q12792 350 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 PTGES3Q15185 160 aaKnown RBP2.77□□□□□ -1.97
CHD9-215ENST00000565442 DEFB116Q30KQ4 102 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 TFDP3Q5H9I0 405 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 SOHLH1Q5JUK2 328 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 CCNJQ5T5M9 372 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 HES5Q5TA89 166 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 MMAAQ8IVH4 418 aaKnown RBP2.77□□□□□ -1.97
CHD9-215ENST00000565442 C12orf56Q8IXR9 622 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 GTPBP8Q8N3Z3 284 aaPredicted RBP2.77□□□□□ -1.97
CHD9-215ENST00000565442 OR7G2Q8NG99 324 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 STARD8Q92502 1023 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 WFIKKN1Q96NZ8 548 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 SERPINB12Q96P63 405 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 RACGAP1Q9H0H5 632 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 SLC40A1Q9NP59 571 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 SAMSN1Q9NSI8 373 aaKnown RBP2.77□□□□□ -1.97
CHD9-215ENST00000565442 ZNF629Q9UEG4 869 aaPredicted RBP2.77□□□□□ -1.97
CHD9-215ENST00000565442 PIKFYVEQ9Y2I7 2098 aa2.77□□□□□ -1.97
CHD9-215ENST00000565442 LRP4O75096 1905 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 GLYATL1P3A0A0U1RQE8 302 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 C9JVG2 144 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 SPAG7O75391 227 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 FTH1P02794 183 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 SERPINA5P05154 406 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 MAGP20916 626 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 SLC25A11Q02978 314 aaKnown RBP2.76□□□□□ -1.97
CHD9-215ENST00000565442 RCN1Q15293 331 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 POU2AF1Q16633 256 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 PTPN20Q4JDL3 420 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 PPM1LQ5SGD2 360 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 ANKRD22Q5VYY1 191 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 CARD17Q5XLA6 110 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 LRRC66Q68CR7 880 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 ABHD13Q7L211 337 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 TTC5Q8N0Z6 440 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 BBS5Q8N3I7 341 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 ZNF578Q96N58 590 aaPredicted RBP2.76□□□□□ -1.97
CHD9-215ENST00000565442 TSNARE1Q96NA8 513 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 OR5B12Q96R08 314 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 PATZ1Q9HBE1 687 aaKnown RBP2.76□□□□□ -1.97
CHD9-215ENST00000565442 NOX3Q9HBY0 568 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 LHX9Q9NQ69 397 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 PSG11Q9UQ72 335 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 ST3GAL6Q9Y274 331 aa2.76□□□□□ -1.97
CHD9-215ENST00000565442 MN1Q10571 1320 aaPredicted RBP2.75□□□□□ -1.97
CHD9-215ENST00000565442 TET2Q6N021 2002 aaPredicted RBP2.75□□□□□ -1.97
CHD9-215ENST00000565442 INS-IGF2F8WCM5 200 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 H0YHG0 523 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 EIF3HO15372 352 aaKnown RBP eCLIP2.75□□□□□ -1.97
CHD9-215ENST00000565442 MAGEB4O15481 346 aaPredicted RBP2.75□□□□□ -1.97
CHD9-215ENST00000565442 IGKV3-11P04433 115 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 TLX1NBP0CAT3 122 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 CDKN2BP42772 138 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 TNNT2P45379 298 aaPredicted RBP2.75□□□□□ -1.97
CHD9-215ENST00000565442 TCP10Q12799 353 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 EIF4EBP2Q13542 120 aaPredicted RBP2.75□□□□□ -1.97
CHD9-215ENST00000565442 CUL2Q13617 745 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 EBI3Q14213 229 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 ALKBH6Q3KRA9 238 aa2.75□□□□□ -1.97
CHD9-215ENST00000565442 C9orf135Q5VTT2 229 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms