RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SLC36A3Q495N2 470 aa13.94□□□□□ -0.18
RAB40C-208ENST00000564703 LNX2Q8N448 690 aa13.94□□□□□ -0.18
RAB40C-208ENST00000564703 ICA1LQ8NDH6 482 aa13.94□□□□□ -0.18
RAB40C-208ENST00000564703 HS3ST6Q96QI5 342 aa13.94□□□□□ -0.18
RAB40C-208ENST00000564703 NMNAT3Q96T66 252 aa13.94□□□□□ -0.18
RAB40C-208ENST00000564703 PAPOLBQ9NRJ5 636 aaKnown RBP13.94□□□□□ -0.18
RAB40C-208ENST00000564703 VSX1Q9NZR4 365 aaPredicted RBP13.94□□□□□ -0.18
RAB40C-208ENST00000564703 UNC79Q9P2D8 2635 aa13.94□□□□□ -0.18
RAB40C-208ENST00000564703 BHLHE40O14503 412 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 PTHP01270 115 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 LAP3P28838 519 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 GIPRP48546 466 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 IDH3GP51553 393 aaPredicted RBP13.93□□□□□ -0.18
RAB40C-208ENST00000564703 PCBD1P61457 104 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAB40C-208ENST00000564703 FAM27BQ5VT28 67 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 SLC27A4Q6P1M0 643 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 SEZ6L2Q6UXD5 910 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 PTCHD4Q6ZW05 846 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 MDP1Q86V88 176 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 AKAP1Q92667 903 aaKnown RBP eCLIP13.93□□□□□ -0.18
RAB40C-208ENST00000564703 SNX18Q96RF0 628 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 TMEM204Q9BSN7 226 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 PLA2G12AQ9BZM1 189 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 NUAK2Q9H093 628 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 PLEKHF2Q9H8W4 249 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 UBTD1Q9HAC8 227 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 B3GNT2Q9NY97 397 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 REV1Q9UBZ9 1251 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 KLHL21Q9UJP4 597 aa13.93□□□□□ -0.18
RAB40C-208ENST00000564703 SETXQ7Z333 2677 aaKnown RBP13.92□□□□□ -0.18
RAB40C-208ENST00000564703 IGKV1D-43A0A0B4J1Z2 117 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 IGHV1-18A0A0C4DH31 117 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 IQCMA0A1B0GVH7 501 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 RIIAD1A6NNX1 92 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 C12orf71A8MTZ7 269 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 VSTM5A8MXK1 200 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 PLAUP00749 431 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 HMGN1P05114 100 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 IGFBP1P08833 259 aaPredicted RBP13.92□□□□□ -0.18
RAB40C-208ENST00000564703 PATE4P0C8F1 98 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 MSR1P21757 451 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 LOXP28300 417 aaPredicted RBP13.92□□□□□ -0.18
RAB40C-208ENST00000564703 KEAP1Q14145 624 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 GINS1Q14691 196 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 ETFDHQ16134 617 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 ADAM5Q6NVV9 412 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 GLB1L2Q8IW92 636 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 ALDH16A1Q8IZ83 802 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 SDR9C7Q8NEX9 313 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 OR8D4Q8NGM9 314 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 PLEKHA8Q96JA3 519 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 OSBPL10Q9BXB5 764 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 S100A14Q9HCY8 104 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 RPRD1BQ9NQG5 326 aaKnown RBP13.92□□□□□ -0.18
RAB40C-208ENST00000564703 KRT84Q9NSB2 600 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 CRNNQ9UBG3 495 aaPredicted RBP13.92□□□□□ -0.18
RAB40C-208ENST00000564703 ENOPH1Q9UHY7 261 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 B9D1Q9UPM9 204 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 COA3Q9Y2R0 106 aaPredicted RBP13.92□□□□□ -0.18
RAB40C-208ENST00000564703 UGT2A1Q9Y4X1 527 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 ATP23Q9Y6H3 246 aa13.92□□□□□ -0.18
RAB40C-208ENST00000564703 CADP27708 2225 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 HS3ST1O14792 307 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 BAG2O95816 211 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 IGKV3-15P01624 115 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 HLA-DQA2P01906 255 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 CST2P09228 141 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 CTLA4P16410 223 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 DNASE1P24855 282 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 GRK5P34947 590 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 DAPP51397 102 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 HSF2Q03933 536 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 GLO1Q04760 184 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 FAHD1Q6P587 224 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 OR1J2Q8NGS2 313 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 OR2T4Q8NH00 348 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 HTRA1Q92743 480 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 FBXW5Q969U6 566 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 PKP2Q99959 881 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 WACQ9BTA9 647 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 CISD1Q9NZ45 108 aaKnown RBP13.91□□□□□ -0.18
RAB40C-208ENST00000564703 OAZ3Q9UMX2 235 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 MOKQ9UQ07 419 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 SPEF1Q9Y4P9 236 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 TIMM10BQ9Y5J6 103 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 FKBP7Q9Y680 259 aa13.91□□□□□ -0.18
RAB40C-208ENST00000564703 OR6C68A6NDL8 312 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 SAC3D1A6NKF1 404 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 H3BNX3 289 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 IGLV1-44P01699 117 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 RAF1P04049 648 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 TP53P04637 393 aaPredicted RBP13.9□□□□□ -0.18
RAB40C-208ENST00000564703 SERPINA5P05154 406 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 CECR9P0C854 216 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 ZNF3P17036 446 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 PAICSP22234 425 aaKnown RBP13.9□□□□□ -0.18
RAB40C-208ENST00000564703 CRISP1P54107 249 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 ESRRGP62508 458 aa13.9□□□□□ -0.18
RAB40C-208ENST00000564703 NAAAQ02083 359 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms