RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 TNIKQ9UKE5 1360 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 NINLQ9Y2I6 1382 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 PRSS37A4D1T9 235 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 SUPT3HB4E1H0 165 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 HAS3O00219 553 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 RGS16O15492 202 aaPredicted RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 PRKAB2O43741 272 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 SPOPO43791 374 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 DIRAS1O95057 198 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 PAHP00439 452 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 OTCP00480 354 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 TPM1P09493 284 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 IMPDH1P20839 514 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 CPN2P22792 545 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 CASP14P31944 242 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 ATP5C1P36542 298 aaKnown RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 EPS15P42566 896 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 CSNK1EP49674 416 aaKnown RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 FGF8P55075 233 aaPredicted RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 CDH6P55285 790 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 CLDN8P56748 225 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 LIPEQ05469 1076 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 PDIA2Q13087 525 aaKnown RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 MAB21L1Q13394 359 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 FZD2Q14332 565 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 RAET1LQ5VY80 246 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 TTC19Q6DKK2 380 aaPredicted RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 TMEM220Q6QAJ8 160 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 TMEM107Q6UX40 140 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 FAM110BQ8TC76 370 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 TSEN15Q8WW01 171 aaKnown RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 ELMO1Q92556 727 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 RNF2Q99496 336 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 CYP3A43Q9HB55 503 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 CTPS2Q9NRF8 586 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 KLHL28Q9NXS3 571 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 PDP1Q9P0J1 537 aaPredicted RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 PACSIN2Q9UNF0 486 aaPredicted RBP2.36□□□□□ -2.03
UBR1-205ENST00000564540 PLA2R1Q13018 1463 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 NFASCO94856 1347 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 TMEM94Q12767 1356 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 PIK3R4Q99570 1358 aa2.36□□□□□ -2.03
UBR1-205ENST00000564540 BRWD3Q6RI45 1802 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 ATP10AO60312 1499 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 TRAV25A0A0B4J276 109 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 ZNF705GA8MUZ8 300 aaPredicted RBP2.35□□□□□ -2.03
UBR1-205ENST00000564540 RNF113AO15541 343 aaKnown RBP2.35□□□□□ -2.03
UBR1-205ENST00000564540 RAMP3O60896 148 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 CLDN9O95484 217 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 FTH1P02794 183 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 S100A9P06702 114 aaKnown RBP2.35□□□□□ -2.03
UBR1-205ENST00000564540 HSMCR30P0CW71 290 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 CRYBB1P53674 252 aaPredicted RBP2.35□□□□□ -2.03
UBR1-205ENST00000564540 PLP1P60201 277 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 ASPHQ12797 758 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 MERTKQ12866 999 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 KLRB1Q12918 225 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 VGLL4Q14135 290 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 SF3A2Q15428 464 aaKnown RBP2.35□□□□□ -2.03
UBR1-205ENST00000564540 HIKESHIQ53FT3 197 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 BEND3Q5T5X7 828 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 ZNF880Q6PDB4 577 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 EIF3MQ7L2H7 374 aaKnown RBP2.35□□□□□ -2.03
UBR1-205ENST00000564540 LUZP2Q86TE4 346 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 TRIM69Q86WT6 500 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 CCDC65Q8IXS2 484 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 C15orf56Q8N910 161 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 TRPV1Q8NER1 839 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 OR1L6Q8NGR2 347 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 OR5W2Q8NH69 310 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 FAM81AQ8TBF8 368 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 CD300LFQ8TDQ1 290 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 TUBGCP2Q9BSJ2 902 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 VANGL2Q9ULK5 521 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 TBC1D24Q9ULP9 559 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 INSRP06213 1382 aa2.35□□□□□ -2.03
UBR1-205ENST00000564540 A0A1W2PPV9 198 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 C9JVG2 144 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 F5H6K3 240 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 GOLGA8SH3BPF8 625 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 GOLGA8TH3BQL2 631 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 POLR2DO15514 142 aaKnown RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 FLOT1O75955 427 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 CT62P0C5K7 136 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 GKN3PP0CG01 181 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 IGHV3-43DP0DP04 118 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 HMGB2P26583 209 aaKnown RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 RPL13AP40429 203 aaKnown RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 CRYBB2P43320 205 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 NAMPTP43490 491 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 QARSP47897 775 aaKnown RBP2.34□□□□□ -2.03
UBR1-205ENST00000564540 CD151P48509 253 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 RAB9AP51151 201 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 C21orf59P57076 290 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 CACNG7P62955 275 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 OGDHQ02218 1023 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 KLRC3Q07444 240 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 DNAJC3Q13217 504 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 ILKQ13418 452 aa2.34□□□□□ -2.03
UBR1-205ENST00000564540 OXA1LQ15070 435 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms