RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 CLCQ05315 142 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 FHL3Q13643 280 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 PMS2P11Q13670 270 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 KLHL26Q53HC5 615 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 SPIN4Q56A73 249 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF678Q5SXM1 525 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 C10orf99Q6UWK7 81 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 CREB3L2Q70SY1 520 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 PNKDQ8N490 385 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 ICA1LQ8NDH6 482 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 SPATA4Q8NEY3 305 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 OR52H1Q8NGJ2 320 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 C17orf50Q8WW18 174 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 MRRFQ96E11 262 aaKnown RBP8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 RNFT2Q96EX2 444 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 TMEM237Q96Q45 408 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 KCNA7Q96RP8 456 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 MRPL57Q9BQC6 102 aaKnown RBP8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 CCDC106Q9BWC9 280 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 MSL2Q9HCI7 577 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 ACER3Q9NUN7 267 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 CCL27Q9Y4X3 112 aa8.43□□□□□ -1.06
HDGFL3-204ENST00000563790 LRP2P98164 4655 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 GNG14A0A1W2PPG7 69 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 H3BNH8 94 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 ANXA4P09525 319 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 IMPDH2P12268 514 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 FRKP42685 505 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 RGS6P49758 472 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 INSL3P51460 131 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 BLCAPP62952 87 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 ACSM2AQ08AH3 577 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF260Q3ZCT1 412 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF385BQ569K4 471 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 ACSM2BQ68CK6 577 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF627Q7L945 461 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF551Q7Z340 670 aaPredicted RBP8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 GPAT4Q86UL3 456 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 RFWD2Q8NHY2 731 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 TMEM234Q8WY98 164 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 EGLN2Q96KS0 407 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 MAGEB18Q96M61 343 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 MRPL46Q9H2W6 279 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 GCM1Q9NP62 436 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 TNFRSF12AQ9NP84 129 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 TCF7L2Q9NQB0 619 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 DDX18Q9NVP1 670 aaKnown RBP8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 GPATCH2Q9NW75 528 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 NMRK1Q9NWW6 199 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 NINJ2Q9NZG7 142 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 LYVE1Q9Y5Y7 322 aa8.42□□□□□ -1.06
HDGFL3-204ENST00000563790 NPIPB9F8W1W9 429 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 GTPBP1O00178 669 aaKnown RBP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 ZSCAN12O43309 604 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 EIF4E2O60573 245 aaKnown RBP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 SMIM24O75264 130 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 KRT6AP02538 564 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 KRT6BP04259 564 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 PAICSP22234 425 aaKnown RBP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 TNFSF4P23510 183 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 MPV17P39210 176 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 GSTM5P46439 218 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 KRT6CP48668 564 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 SMCPP49901 116 aaPredicted RBP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 CCR4P51679 360 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 PRB3Q04118 309 aaPredicted RBP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 C2orf54Q08AI8 447 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 KLRD1Q13241 179 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 KIAA0040Q15053 153 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 DUSP5Q16690 384 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF718Q3SXZ3 478 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 C18orf65Q6ZTR6 163 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 OR2W3Q7Z3T1 314 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 PIGWQ7Z7B1 504 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 MMGT1Q8N4V1 131 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 TMEM99Q8N816 258 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF614Q8N883 585 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 SLC30A7Q8NEW0 376 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 SLC26A10Q8NG04 563 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 DCAKDQ8WVC6 231 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 ZNF764Q96H86 408 aaPredicted RBP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 NAPGQ99747 312 aaPredicted RBP8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 RETNQ9HD89 108 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 GIMAP4Q9NUV9 329 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 KIAA1456Q9P272 454 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 IL19Q9UHD0 177 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 DTNAQ9Y4J8 743 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 TIMM22Q9Y584 194 aa8.41□□□□□ -1.06
HDGFL3-204ENST00000563790 C16orf90A8MZG2 172 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 RNASET2O00584 256 aaKnown RBP8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 ANKRD28O15084 1053 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 GP9P14770 177 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 UBE2E1P51965 193 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 GNG11P61952 73 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 CAV1Q03135 178 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 C2orf80Q0P641 193 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 UAP1Q16222 522 aaPredicted RBP8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 C11orf91Q3C1V1 193 aa8.4□□□□□ -1.06
HDGFL3-204ENST00000563790 VPS26BQ4G0F5 336 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms