RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 A0A0J9YVX5 310 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 A0A1B0GX78 115 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 VSTM2BA6NLU5 285 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 C9J4A7 227 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 H0YGG7 62 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 TXNDC9O14530 226 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 HAT1O14929 419 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 TAPBPO15533 448 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 P2RX6O15547 441 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 GPRIN2O60269 458 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 KLF7O75840 302 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 CEACAM4O75871 244 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 KLHL2O95198 593 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 C2P06681 752 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 KLK3P07288 261 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 B4GALT1P15291 398 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 DRD5P21918 477 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 DPP4P27487 766 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 PTPN4P29074 926 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 SHC1P29353 583 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 FCGR2BP31994 310 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 SLC1A3P43003 542 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 OR3A2P47893 321 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 SERPINB8P50452 374 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 VSX2P58304 361 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 RPS15AP62244 130 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 REEP5Q00765 189 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 GTF3C1Q12789 2109 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 GPR50Q13585 617 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 HEPACAMQ14CZ8 416 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 SPHARQ15513 63 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 LINC00303Q3SY05 128 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 GPAT3Q53EU6 434 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 FGD3Q5JSP0 725 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 SLC27A4Q6P1M0 643 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 PRMT9Q6P2P2 845 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 FAM199XQ6PEV8 388 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 LRRC70Q7Z2Q7 622 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 YRDCQ86U90 279 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 THOC6Q86W42 341 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 C17orf64Q86WR6 236 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 ZNF679Q8IYX0 411 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 SLC43A2Q8N370 569 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 TCAIMQ8N3R3 496 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 LRTM2Q8N967 370 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 TTC29Q8NA56 475 aaPredicted RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 Q8NBF4 154 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 RHEBL1Q8TAI7 183 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 HIST1H2ACQ93077 130 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 NEIL2Q969S2 332 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 WDR34Q96EX3 536 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 MED8Q96G25 268 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 PRAP1Q96NZ9 151 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 CCT7Q99832 543 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 DCTN5Q9BTE1 182 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 TBCDQ9BTW9 1192 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 MRPL13Q9BYD1 178 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 WDR54Q9H977 334 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 NMRAL1Q9HBL8 299 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 CUTCQ9NTM9 273 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 DDX28Q9NUL7 540 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 DHCR7Q9UBM7 475 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 PTBP2Q9UKA9 531 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 SLC22A14Q9Y267 594 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 FARSAQ9Y285 508 aaKnown RBP3.99□□□□□ -1.77
LINC00254-201ENST00000563416 ACOT9Q9Y305 439 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 WIPI2Q9Y4P8 454 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 ETV7Q9Y603 341 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 ZNF462Q96JM2 2506 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 NCKAP5O14513 1909 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 PCNX3Q9H6A9 2034 aa3.99□□□□□ -1.77
LINC00254-201ENST00000563416 FASNP49327 2511 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SVILO95425 2214 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 FLNCQ14315 2725 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 NUP214P35658 2090 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 HIVEP3Q5T1R4 2406 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 EXOC1LA0A1B0GW35 172 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ATP6AP2A0A1C7CYW4 349 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 A0A1W2PQ72 361 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SYCE1LA8MT33 242 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 A8MUI8 341 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 TRIM49D1C9J1S8 452 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 TFECO14948 347 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 LCMT2O60294 686 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 NSA2O95478 260 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SNRPAP09012 282 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SLC35G6P0C7Q6 338 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 RPA2P15927 270 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 GATA1P15976 413 aaPredicted RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 ACADSP16219 412 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CALB2P22676 271 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 SOX3P41225 446 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CCR4P51679 360 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 CCR8P51685 355 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 DSCR10P59022 87 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 VSNL1P62760 191 aa3.98□□□□□ -1.77
LINC00254-201ENST00000563416 RPS15P62841 145 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 DCDP81605 110 aaKnown RBP3.98□□□□□ -1.77
LINC00254-201ENST00000563416 FUT7Q11130 342 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms