RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 MTX3Q5HYI7 312 aa24.45■■□□□ 1.5
NME3-203ENST00000563367 ZNF442Q9H7R0 627 aa24.45■■□□□ 1.5
NME3-203ENST00000563367 BARX1Q9HBU1 254 aaPredicted RBP24.45■■□□□ 1.5
NME3-203ENST00000563367 KRCC1Q9NPI7 259 aaPredicted RBP24.45■■□□□ 1.5
NME3-203ENST00000563367 FBXL3Q9UKT7 428 aa24.45■■□□□ 1.5
NME3-203ENST00000563367 SSX4O60224 188 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 MMP7P09237 267 aaPredicted RBP24.44■■□□□ 1.5
NME3-203ENST00000563367 NR2C1P13056 603 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 RAB35Q15286 201 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 EFNB3Q15768 340 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 SGCAQ16586 387 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 MESTQ5EB52 335 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 TMEM53Q6P2H8 277 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 DPPA2Q7Z7J5 298 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 FNDC8Q8TC99 324 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 RASD2Q96D21 266 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 GPX7Q96SL4 187 aaPredicted RBP24.44■■□□□ 1.5
NME3-203ENST00000563367 THTPAQ9BU02 230 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 NRIP3Q9NQ35 241 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 PMF1-BGLAPU3KQ54 211 aa24.44■■□□□ 1.5
NME3-203ENST00000563367 NPR2P20594 1047 aa24.43■■□□□ 1.5
NME3-203ENST00000563367 MAGEA2P43356 314 aa24.43■■□□□ 1.5
NME3-203ENST00000563367 BIVMQ86UB2 503 aa24.43■■□□□ 1.5
NME3-203ENST00000563367 CCDC124Q96CT7 223 aaKnown RBP24.43■■□□□ 1.5
NME3-203ENST00000563367 ZNF570Q96NI8 536 aa24.43■■□□□ 1.5
NME3-203ENST00000563367 NDEL1Q9GZM8 345 aa24.43■■□□□ 1.5
NME3-203ENST00000563367 TEX13CA0A0J9YWL9 993 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 TMEM129A0AVI4 362 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 SLC22A23A1A5C7 686 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 B9A039 149 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 OR10H3O60404 316 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 BMP4P12644 408 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 SNRPD2P62316 118 aaKnown RBP24.42■■□□□ 1.5
NME3-203ENST00000563367 MSMPQ1L6U9 139 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 FOXL2NBQ6ZUU3 175 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 PAQR4Q8N4S7 273 aaPredicted RBP24.42■■□□□ 1.5
NME3-203ENST00000563367 PLK3Q9H4B4 646 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 TMCC3Q9ULS5 477 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 IER3IP1Q9Y5U9 82 aa24.42■■□□□ 1.5
NME3-203ENST00000563367 GPRIN2O60269 458 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 MGRN1O60291 552 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 CCL2P13500 99 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 HMGA2P52926 109 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 NUDT6P53370 316 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 FAM27BQ5VT28 67 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 SMARCD3Q6STE5 483 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 DPY19L2P2Q6ZN68 376 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 SLC30A7Q8NEW0 376 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 ASB9Q96DX5 294 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 MAGIXQ9H6Y5 334 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 LYVE1Q9Y5Y7 322 aa24.41■■□□□ 1.5
NME3-203ENST00000563367 ZFHX3Q15911 3703 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 PRSS37A4D1T9 235 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 XKRYO14609 159 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 IMPA2O14732 288 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 ACOT8O14734 319 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 KRT36O76013 467 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 LY6HO94772 140 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 SCG5P05408 212 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 ZNF32P17041 273 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 FPR3P25089 353 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 SDHAP31040 664 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 KRR1Q13601 381 aaKnown RBP24.4■■□□□ 1.5
NME3-203ENST00000563367 GPR139Q6DWJ6 353 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 C1orf94Q6P1W5 598 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 SVOPLQ8N434 492 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 CPEB3Q8NE35 698 aaKnown RBP24.4■■□□□ 1.5
NME3-203ENST00000563367 DOK1Q99704 481 aa24.4■■□□□ 1.5
NME3-203ENST00000563367 CSPG4Q6UVK1 2322 aa24.39■■□□□ 1.5
NME3-203ENST00000563367 A0A1W2PPL8 197 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 RNF223E7ERA6 249 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 SOCS2O14508 198 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 LAP3P28838 519 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 GSSP48637 474 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 EFNA4P52798 201 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 PABPC1L2AQ5JQF8 200 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 PGBD2Q6P3X8 592 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 PTCHD4Q6ZW05 846 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 Q71RC1 249 aaPredicted RBP24.39■■□□□ 1.49
NME3-203ENST00000563367 OR4C15Q8NGM1 316 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 FANK1Q8TC84 345 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 SLC7A6OSQ96CW6 309 aaPredicted RBP24.39■■□□□ 1.49
NME3-203ENST00000563367 SORCS2Q96PQ0 1159 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 KCNN2Q9H2S1 579 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 CCNB1IP1Q9NPC3 277 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 CMAHPQ9Y471 501 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 SPEF1Q9Y4P9 236 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 C2CD3Q4AC94 2353 aa24.39■■□□□ 1.49
NME3-203ENST00000563367 TLN2Q9Y4G6 2542 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 VSTM5A8MXK1 200 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 TNFRSF11BO00300 401 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 AHCYL1O43865 530 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 PPP1R3DO95685 299 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 LY6G6DO95868 133 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 TXNDC12O95881 172 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 CTLA4P16410 223 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 APEX1P27695 318 aaKnown RBP24.38■■□□□ 1.49
NME3-203ENST00000563367 GLRXP35754 106 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 GALK2Q01415 458 aa24.38■■□□□ 1.49
NME3-203ENST00000563367 RFX4Q33E94 735 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms