RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 GLCCI1Q86VQ1 547 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 HAVCR2Q8TDQ0 301 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 ASB17Q8WXJ9 295 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 LOXL4Q96JB6 756 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 GNRHR2Q96P88 292 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 DCBLD2Q96PD2 775 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 ABHD1Q96SE0 405 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 ANGPTL4Q9BY76 406 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 SLC22A13Q9Y226 551 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 RAD1O60671 282 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 ZNF254O75437 659 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 ADRA2CP18825 462 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 PITPNBP48739 271 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 ROM1Q03395 351 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 SELENBP1Q13228 472 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 TMEM176BQ3YBM2 270 aaPredicted RBP17.09■□□□□ 0.33
SMPD3-203ENST00000563226 LINC00346Q8IVM7 164 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 TMEM156Q8N614 296 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 RNF128Q8TEB7 428 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 PAQR8Q8TEZ7 354 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 WACQ9BTA9 647 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 STRADBQ9C0K7 418 aa17.09■□□□□ 0.33
SMPD3-203ENST00000563226 TMEM212A6NML5 194 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 C9orf172C9J069 976 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 CLDN12P56749 244 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 STPG1Q5TH74 334 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 TMEM81Q6P7N7 255 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 STAC2Q6ZMT1 411 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 KRT77Q7Z794 578 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 NAXDQ8IW45 347 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 NTNG2Q96CW9 530 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 COMMD4Q9H0A8 199 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.08■□□□□ 0.33
SMPD3-203ENST00000563226 LRP12Q9Y561 859 aa17.08■□□□□ 0.33
SMPD3-203ENST00000563226 TRAV8-7A0A075B6U6 113 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 IFITM5A6NNB3 132 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 HSPB2A8KAH6 182 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 SLC43A1O75387 559 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 ADRB1P08588 477 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 MAP2K3P46734 347 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 HSPB2Q16082 182 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 FAM205BPQ63HN1 556 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 FDX2Q6P4F2 183 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 GPAT4Q86UL3 456 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 UBQLNLQ8IYU4 475 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 DNAAF1Q8NEP3 725 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 OR52N5Q8NH56 324 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 ZNF671Q8TAW3 534 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 TRIM63Q969Q1 353 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 JSRP1Q96MG2 331 aaPredicted RBP17.08■□□□□ 0.32
SMPD3-203ENST00000563226 HPF1Q9NWY4 346 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 KLHL13Q9P2N7 655 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 TEKT2Q9UIF3 430 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 FBXL3Q9UKT7 428 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 SPATA2Q9UM82 520 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 GTF2A1LQ9UNN4 478 aa17.08■□□□□ 0.32
SMPD3-203ENST00000563226 TRBV5-7A0A0A0MS05 114 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 AIPO00170 330 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 PDCD5O14737 125 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 TRAF3IP2O43734 574 aaPredicted RBP17.07■□□□□ 0.32
SMPD3-203ENST00000563226 JMJD7P0C870 316 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 LIFP15018 202 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 DPP4P27487 766 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 EIF1P41567 113 aaKnown RBP17.07■□□□□ 0.32
SMPD3-203ENST00000563226 EIF2B2P49770 351 aaKnown RBP17.07■□□□□ 0.32
SMPD3-203ENST00000563226 RASGEF1BQ0VAM2 473 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 TEX30Q5JUR7 227 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 AGAP6Q5VW22 663 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 SLC22A10Q63ZE4 541 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 B3GNTL1Q67FW5 361 aaPredicted RBP17.07■□□□□ 0.32
SMPD3-203ENST00000563226 DNM1P34Q6PK57 102 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 LRRTM1Q86UE6 522 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 RAB43Q86YS6 212 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 UEVLDQ8IX04 471 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 ZBTB8AQ96BR9 441 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 AGAP4Q96P64 663 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 TAAR9Q96RI9 348 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 HDHD2Q9H0R4 259 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 FOXJ2Q9P0K8 574 aa17.07■□□□□ 0.32
SMPD3-203ENST00000563226 PCDHGA9Q9Y5G4 932 aaKnown RBP17.07■□□□□ 0.32
SMPD3-203ENST00000563226 CENPBD1B2RD01 187 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 KHDRBS3O75525 346 aaKnown RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 IGHEP01854 428 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ADH6P28332 368 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 CAMK2DQ13557 499 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 KCTD18Q6PI47 426 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 CORO6Q6QEF8 472 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 DCXRQ7Z4W1 244 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 AKAP14Q86UN6 197 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 GTPBP8Q8N3Z3 284 aaPredicted RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ADPRHL1Q8NDY3 354 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 GPR148Q8TDV2 347 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 ST7LQ8TDW4 575 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 TMEM106AQ96A25 262 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 MRPL13Q9BYD1 178 aaKnown RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 SPRY4Q9C004 299 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 TCF7L1Q9HCS4 588 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 V9GY05 133 aa17.06■□□□□ 0.32
SMPD3-203ENST00000563226 PHF3Q92576 2039 aaKnown RBP17.06■□□□□ 0.32
SMPD3-203ENST00000563226 A0A0G2JMM0 328 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms