RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 SERPINA5P05154 406 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 MMP7P09237 267 aaPredicted RBP16.7■□□□□ 0.26
TMEM249-202ENST00000562477 CCL2P13500 99 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 NR4A1P22736 598 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 NUDT6P53370 316 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 TRIM25Q14258 630 aaKnown RBP16.7■□□□□ 0.26
TMEM249-202ENST00000562477 RAB35Q15286 201 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 ETFDHQ16134 617 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 THEM4Q5T1C6 240 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 TMEM53Q6P2H8 277 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 DNM1P46Q6ZS02 220 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 DHFR2Q86XF0 187 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 SVOPLQ8N434 492 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 ZNF570Q96NI8 536 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 ZNF442Q9H7R0 627 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 SIAEQ9HAT2 523 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 BARX1Q9HBU1 254 aaPredicted RBP16.7■□□□□ 0.26
TMEM249-202ENST00000562477 GRHPRQ9UBQ7 328 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 PRPF19Q9UMS4 504 aaKnown RBP16.7■□□□□ 0.26
TMEM249-202ENST00000562477 IER3IP1Q9Y5U9 82 aa16.7■□□□□ 0.26
TMEM249-202ENST00000562477 A0A1W2PPL8 197 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 TMEM129A0AVI4 362 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 SLC22A23A1A5C7 686 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 RNF223E7ERA6 249 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 OR10H3O60404 316 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 ENTPD5O75356 428 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 SCG5P05408 212 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 SNRPD2P62316 118 aaKnown RBP16.69■□□□□ 0.26
TMEM249-202ENST00000562477 KRR1Q13601 381 aaKnown RBP16.69■□□□□ 0.26
TMEM249-202ENST00000562477 EFNB3Q15768 340 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 SLC36A2Q495M3 483 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 NRN1LQ496H8 165 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 MTX3Q5HYI7 312 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 BIVMQ86UB2 503 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 SLC30A7Q8NEW0 376 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 FOXN4Q96NZ1 517 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 SORCS2Q96PQ0 1159 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 GPX7Q96SL4 187 aaPredicted RBP16.69■□□□□ 0.26
TMEM249-202ENST00000562477 THTPAQ9BU02 230 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 PLK3Q9H4B4 646 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 VNN3Q9NY84 501 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 PMF1-BGLAPU3KQ54 211 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 NF1P21359 2839 aa16.69■□□□□ 0.26
TMEM249-202ENST00000562477 FN1P02751 2386 aaKnown RBP16.69■□□□□ 0.26
TMEM249-202ENST00000562477 B9A039 149 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 LY6G6DO95868 133 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 ZNF32P17041 273 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 NPR2P20594 1047 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 MAGEA2P43356 314 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 PPP1R8Q12972 351 aaKnown RBP16.68■□□□□ 0.26
TMEM249-202ENST00000562477 PABPC1L2AQ5JQF8 200 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 OTPQ5XKR4 325 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 CLEC9AQ6UXN8 241 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 FOXL2NBQ6ZUU3 175 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 DPPA2Q7Z7J5 298 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 ZNF525Q8N782 197 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 OR9Q2Q8NGE9 314 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 FANK1Q8TC84 345 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 NDEL1Q9GZM8 345 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 C1orf21Q9H246 121 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 OR51B6Q9H340 312 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 MUC13Q9H3R2 512 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 KRCC1Q9NPI7 259 aaPredicted RBP16.68■□□□□ 0.26
TMEM249-202ENST00000562477 NRIP3Q9NQ35 241 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 FBXL3Q9UKT7 428 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 TMCC3Q9ULS5 477 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 FZR1Q9UM11 496 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 LYVE1Q9Y5Y7 322 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 NAV3Q8IVL0 2385 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 ABCA1O95477 2261 aa16.68■□□□□ 0.26
TMEM249-202ENST00000562477 IGHV4-30-2A0A087WSY4 118 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 PRSS37A4D1T9 235 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 SOCS2O14508 198 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 XKRYO14609 159 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 ACOT8O14734 319 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 MGRN1O60291 552 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 PPP1R3DO95685 299 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 NR2C1P13056 603 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 CTLA4P16410 223 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 FPR3P25089 353 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 APEX1P27695 318 aaKnown RBP16.67■□□□□ 0.26
TMEM249-202ENST00000562477 LAP3P28838 519 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 DBPQ10586 325 aaPredicted RBP16.67■□□□□ 0.26
TMEM249-202ENST00000562477 PGBD2Q6P3X8 592 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 SMARCD3Q6STE5 483 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 UGT2A3Q6UWM9 527 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 DPY19L2P2Q6ZN68 376 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 PTCHD4Q6ZW05 846 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 ZCCHC24Q8N2G6 241 aaKnown RBP16.67■□□□□ 0.26
TMEM249-202ENST00000562477 CPEB3Q8NE35 698 aaKnown RBP16.67■□□□□ 0.26
TMEM249-202ENST00000562477 OR4C15Q8NGM1 316 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 AKR7LQ8NHP1 331 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 DOK1Q99704 481 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 VRK1Q99986 396 aaPredicted RBP16.67■□□□□ 0.26
TMEM249-202ENST00000562477 REG4Q9BYZ8 158 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 MRPL37Q9BZE1 423 aaKnown RBP16.67■□□□□ 0.26
TMEM249-202ENST00000562477 EMC7Q9NPA0 242 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 CCNB1IP1Q9NPC3 277 aa16.67■□□□□ 0.26
TMEM249-202ENST00000562477 ANK3Q12955 4377 aaKnown RBP16.66■□□□□ 0.26
TMEM249-202ENST00000562477 NIPBLQ6KC79 2804 aaeCLIP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms