RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 OR1J1Q8NGS3 322 aa14.21□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 MOSPD2Q8NHP6 518 aa14.21□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 TSPEARQ8WU66 669 aa14.21□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 RASSF5Q8WWW0 418 aa14.21□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 NMD3Q96D46 503 aaKnown RBP14.21□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 INIPQ9NRY2 104 aa14.21□□□□□ -0.13
VPS9D1-AS1-201ENST00000562298 PLPP2O43688 288 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MGRN1O60291 552 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SHOX2O60902 331 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MPZL1O95297 269 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ZNF32P17041 273 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 EPHA1P21709 976 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CCNOP22674 350 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 APLNRP35414 380 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 WNT5AP41221 380 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 RBM34P42696 430 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 DAP3P51398 398 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TAS2R41P59536 307 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 HILS1P60008 231 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MRPS34P82930 218 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 FMODQ06828 376 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SCGB2A2Q13296 93 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 PIN1Q13526 163 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TSTQ16762 297 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 RABL3Q5HYI8 236 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SPATA46Q5T0L3 261 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 NANOGP8Q6NSW7 305 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ZNF418Q8TF45 676 aaPredicted RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TMEM239Q8WW34 195 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 LIPHQ8WWY8 451 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 HDAC2Q92769 488 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SGTBQ96EQ0 304 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 POM121L2Q96KW2 1035 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TMPRSS13Q9BYE2 586 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 PLA2G12AQ9BZM1 189 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 LRMDAQ9H2I8 198 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SAP30LQ9HAJ7 183 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SIAEQ9HAT2 523 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 NPHS2Q9NP85 383 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 DECR2Q9NUI1 292 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 INTS9Q9NV88 658 aaKnown RBP14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 PCDHB10Q9UN67 800 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 WIPI2Q9Y4P8 454 aa14.2□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 LOC100509620A0A075B734 347 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CLDN25C9JDP6 229 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TPD52L2O43399 206 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 IGF2P01344 180 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 IGHV2-5P01817 119 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ANPEPP15144 967 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MAKP20794 623 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 DRD4P21917 467 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 STOMP27105 288 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MPV17P39210 176 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MMP15P51511 669 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 TEKQ02763 1124 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 HSF2Q03933 536 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 HDDC2Q7Z4H3 204 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CALHM3Q86XJ0 350 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 AKR7LQ8NHP1 331 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 IPCEF1Q8WWN9 437 aaPredicted RBP14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 NSMAFQ92636 917 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MARS2Q96GW9 593 aaKnown RBP14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MAGEB18Q96M61 343 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SMURF2Q9HAU4 748 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 RIMS3Q9UJD0 308 aa14.19□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MEGF8Q7Z7M0 2845 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 NPIPB13A6NJU9 1138 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 NPIPB4C9JG80 1138 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 FXYD1O00168 92 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 PIP5K1CO60331 668 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 OR5F1O95221 314 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 IGHV1-46P01743 117 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MT-ND5P03915 603 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 OR1E2P47887 323 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 COMPP49747 757 aaPredicted RBP14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ZNF81P51508 661 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ARFIP2P53365 341 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ACTG1P63261 375 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 PSG4Q00888 419 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 LAPTM4AQ15012 233 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 MOGQ16653 247 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 HFEQ30201 348 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 THEM4Q5T1C6 240 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 USP43Q70EL4 1123 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 FAM216AQ8WUB2 273 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 RAB39BQ96DA2 213 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 POLR2J2Q9GZM3 115 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 POLR2J3Q9H1A7 115 aaKnown RBP14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CCNB1IP1Q9NPC3 277 aa14.18□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 A0A0G2JMP0 313 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 A0A0G2JND7 137 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 A0A0X1KG70 313 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 C5orf49A4QMS7 147 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ZSCAN5BA6NJL1 495 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 SPRY3O43610 288 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 EDF1O60869 148 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 VIMP08670 466 aaKnown RBP14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ADRA2CP18825 462 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 ERVK-25P63136 954 aa14.17□□□□□ -0.14
VPS9D1-AS1-201ENST00000562298 CD47Q08722 323 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms