RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 GAGE1Q13065 139 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 SRSF5Q13243 272 aaKnown RBP16.94■□□□□ 0.3
RAB40C-206ENST00000561781 VITQ6UXI7 678 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 NRMQ8IXM6 262 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 OR7G2Q8NG99 324 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 GFI1Q99684 422 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 CYTL1Q9NRR1 136 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 CD84Q9UIB8 345 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 A0A0B4J2A0 478 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 ARG1P05089 322 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 DAOP14920 347 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 MSX1P28360 303 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 CORO1AP31146 461 aaKnown RBP16.94■□□□□ 0.3
RAB40C-206ENST00000561781 PNLIPRP1P54315 467 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 PCBP4P57723 403 aaKnown RBP16.94■□□□□ 0.3
RAB40C-206ENST00000561781 RPS15P62841 145 aaKnown RBP16.94■□□□□ 0.3
RAB40C-206ENST00000561781 CDK5R1Q15078 307 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF311Q5JNZ3 666 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 OR2A2Q6IF42 318 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 EIF5AL1Q6IS14 154 aaKnown RBP16.94■□□□□ 0.3
RAB40C-206ENST00000561781 HIST3H2BBQ8N257 126 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 GPR137CQ8N3F9 429 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF433Q8N7K0 673 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-206ENST00000561781 SECTM1Q8WVN6 248 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 TTTY10Q9BZA0 68 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 UBE2ZQ9H832 354 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-206ENST00000561781 SHPKQ9UHJ6 478 aa16.94■□□□□ 0.3
RAB40C-206ENST00000561781 MTCL1Q9Y4B5 1905 aaKnown RBP16.93■□□□□ 0.3
RAB40C-206ENST00000561781 OR2AG2A6NM03 316 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 CDC42EP2O14613 210 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 CYTIPO60759 359 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 GLCEO94923 617 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 SLCO2B1O94956 709 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 CTSLP07711 333 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 CLDN12P56749 244 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 RPS11P62280 158 aaKnown RBP eCLIP16.93■□□□□ 0.3
RAB40C-206ENST00000561781 DHRS2Q13268 280 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 KHDC3LQ587J8 217 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 STPG1Q5TH74 334 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 AWAT2Q6E213 333 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 UNQ9370/PRO34162Q6UXP9 181 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 TMED4Q7Z7H5 227 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 TMEM150AQ86TG1 271 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 CD163Q86VB7 1156 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 KLHDC8AQ8IYD2 350 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF610Q8N9Z0 462 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 ST7LQ8TDW4 575 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 C2orf15Q8WU43 125 aaKnown RBP16.93■□□□□ 0.3
RAB40C-206ENST00000561781 DIO2Q92813 273 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 FOXRED1Q96CU9 486 aaPredicted RBP16.93■□□□□ 0.3
RAB40C-206ENST00000561781 GALNT14Q96FL9 552 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 NCDNQ9UBB6 729 aa16.93■□□□□ 0.3
RAB40C-206ENST00000561781 TBC1D3BA6NDS4 549 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 DLEU1O43261 78 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 XRCC3O43542 346 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 CD1AP06126 327 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 TBC1D3HP0C7X1 549 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 FGF7P21781 194 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 TBC1D3GQ6DHY5 549 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 LILRA3Q8N6C8 439 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF740Q8NDX6 193 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 POTEKPQ9BYX7 375 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF350Q9GZX5 532 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 GPR55Q9Y2T6 319 aaPredicted RBP16.92■□□□□ 0.3
RAB40C-206ENST00000561781 NOTCH4Q99466 2003 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 ITPKBP27987 946 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 HTR2CP28335 458 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 AQP2P41181 271 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 ZNF84P51523 738 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 TBPL1P62380 186 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 ST3GAL3Q11203 375 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 SCGB2B2Q4G0G5 96 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 BTNL8Q6UX41 500 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 CDK20Q8IZL9 346 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 ASB17Q8WXJ9 295 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 ZBTB8AQ96BR9 441 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 SLC35G5Q96KT7 338 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 NOX4Q9NPH5 578 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 NTNG1Q9Y2I2 539 aa16.92■□□□□ 0.3
RAB40C-206ENST00000561781 CCSO14618 274 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 EREGO14944 169 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 KLF4O43474 513 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 PTBP3O95758 552 aaKnown RBP16.91■□□□□ 0.3
RAB40C-206ENST00000561781 ZGLP1P0C6A0 271 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 IRF1P10914 325 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 NPPBP16860 134 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 SLC6A9P48067 706 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 STEAP1BQ6NZ63 245 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 OR10AD1Q8NGE0 317 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 SLC22A12Q96S37 553 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 S1PR5Q9H228 398 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 IL21Q9HBE4 155 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 CRLF2Q9HC73 371 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 ASCL3Q9NQ33 180 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.91■□□□□ 0.3
RAB40C-206ENST00000561781 A0A1W2PPE2 198 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 CATP04040 527 aaKnown RBP16.91■□□□□ 0.3
RAB40C-206ENST00000561781 CD200P41217 278 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 LPAR6P43657 344 aa16.91■□□□□ 0.3
RAB40C-206ENST00000561781 SSBP1Q04837 148 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms