RNA–Protein interactions for RNA: ENST00000560628.1

LDLR-214, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-214ENST00000560628 GPR6P46095 362 aaPredicted RBP8.75□□□□□ -1.01
LDLR-214ENST00000560628 CDH15P55291 814 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 CTXN1P60606 82 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 GLO1Q04760 184 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 LIPEQ05469 1076 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 CD47Q08722 323 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 ALG10Q5BKT4 473 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 PABPC1L2AQ5JQF8 200 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 C10orf128Q5T292 105 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 SLC25A47Q6Q0C1 308 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 HDDC2Q7Z4H3 204 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 DPPA2Q7Z7J5 298 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 NRMQ8IXM6 262 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 SLC15A3Q8IY34 581 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 OR51A7Q8NH64 312 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 AKR7LQ8NHP1 331 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 ZNF519Q8TB69 540 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 LZICQ8WZA0 190 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 GTF3AQ92664 365 aaKnown RBP8.75□□□□□ -1.01
LDLR-214ENST00000560628 NMD3Q96D46 503 aaKnown RBP8.75□□□□□ -1.01
LDLR-214ENST00000560628 BPIFA2Q96DR5 249 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 PRRC1Q96M27 445 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 FNDC11Q9BVV2 318 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 TXNIPQ9H3M7 391 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 SIAEQ9HAT2 523 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 LPAR2Q9HBW0 351 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 CCNB1IP1Q9NPC3 277 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 HINT3Q9NQE9 182 aaKnown RBP8.75□□□□□ -1.01
LDLR-214ENST00000560628 ZNF275Q9NSD4 429 aaPredicted RBP8.75□□□□□ -1.01
LDLR-214ENST00000560628 TREM2Q9NZC2 230 aa8.75□□□□□ -1.01
LDLR-214ENST00000560628 TMEFF2Q9UIK5 374 aaPredicted RBP8.75□□□□□ -1.01
LDLR-214ENST00000560628 TRAV27A0A087WT01 109 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 C17orf100A8MU93 164 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 CENPBD1B2RD01 187 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 FFAR1O14842 300 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 GSTA4O15217 222 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 ZNF682O95780 498 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 IGF2P01344 180 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 SAGP10523 405 aaPredicted RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 COX4I1P13073 169 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 ZNF250P15622 560 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 ZNF32P17041 273 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 ACHEP22303 614 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 STOMP27105 288 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 IFNA8P32881 189 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 SRP14P37108 136 aaKnown RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 ZNF133P52736 654 aaPredicted RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 TMEM33P57088 247 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 KLF3P57682 345 aaPredicted RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 RPL27P61353 136 aaKnown RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 ERVK-25P63136 954 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 CCL8P80075 99 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 MRPS34P82930 218 aaKnown RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 PSG4Q00888 419 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 TSTQ16762 297 aaKnown RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 NRN1LQ496H8 165 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 SPATA46Q5T0L3 261 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 TMEM154Q6P9G4 183 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 TBPL2Q6SJ96 375 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 FKBP9P1Q75LS8 142 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 OR1J1Q8NGS3 322 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 CLDND2Q8NHS1 167 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 RP9Q8TA86 221 aaKnown RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 NABP1Q96AH0 204 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 RBP7Q96R05 134 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 C1orf198Q9H425 327 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 STX18Q9P2W9 335 aaKnown RBP8.74□□□□□ -1.01
LDLR-214ENST00000560628 GPR160Q9UJ42 338 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 HIF3AQ9Y2N7 669 aa8.74□□□□□ -1.01
LDLR-214ENST00000560628 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.74□□□□□ -1.012e-6■□□□□ 8.4
LDLR-214ENST00000560628 CUBNO60494 3623 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 IGLV3-9A0A075B6K5 115 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 LOC100509620A0A075B734 347 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 C5orf49A4QMS7 147 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 EFCAB9A8MZ26 197 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 FAM157AC9JC47 383 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 CXCR6O00574 342 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 TPD52L2O43399 206 aaKnown RBP8.73□□□□□ -1.01
LDLR-214ENST00000560628 MGRN1O60291 552 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 RP2O75695 350 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 SNAP29O95721 258 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 IFNW1P05000 195 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 NCK1P16333 377 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 DRD4P21917 467 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 LAP3P28838 519 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 THBS2P35442 1172 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 WNT5AP41221 380 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 GDI2P50395 445 aaKnown RBP8.73□□□□□ -1.01
LDLR-214ENST00000560628 SLC7A2P52569 658 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 MVKQ03426 396 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 PRKCDQ05655 676 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 FHL1Q13642 323 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 TRAM2Q15035 370 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 THEM4Q5T1C6 240 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 FAM27BQ5VT28 67 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 ZNF730Q6ZMV8 503 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 RINLQ6ZS11 566 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 OAFQ86UD1 273 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 LRRC75AQ8NAA5 344 aa8.73□□□□□ -1.01
LDLR-214ENST00000560628 OR13C2Q8NGS9 318 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms