RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CSF2RBP32927 897 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 TRHRP34981 398 aaPredicted RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 MC3RP41968 323 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 FASLGP48023 281 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 PTH2RP49190 550 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 HCCSP53701 268 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 UBE2MP61081 183 aaKnown RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 EGR3Q06889 387 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 SNTB1Q13884 538 aaKnown RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 CBFBQ13951 182 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 GUCA2BQ16661 112 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 PNLIPRP3Q17RR3 467 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 LINC00303Q3SY05 128 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 PLEKHN1Q494U1 663 aaPredicted RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 CDNFQ49AH0 187 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 MANEAQ5SRI9 462 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 OR5M10Q6IEU7 315 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 RAB12Q6IQ22 244 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 PWWP2BQ6NUJ5 590 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ULK3Q6PHR2 472 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 FCRLAQ7L513 359 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 SLC36A1Q7Z2H8 476 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 NUP54Q7Z3B4 507 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 DND1Q8IYX4 353 aaKnown RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 LMNTD1Q8N9Z9 388 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 LINC01555Q8NAE3 123 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 OR2A1Q8NGT9 310 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 OR5AK2Q8NH90 309 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 STOML3Q8TAV4 291 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 NT5CQ8TCD5 201 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ASB17Q8WXJ9 295 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 PTX4Q96A99 478 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 CNRIP1Q96F85 164 aaPredicted RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 CXorf58Q96LI9 332 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 SCGB3A2Q96PL1 93 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 DERL3Q96Q80 235 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 LRRC61Q9BV99 259 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 DUSP23Q9BVJ7 150 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 SRMSQ9H3Y6 488 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 KLHL31Q9H511 634 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 AUNIPQ9H7T9 357 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 NOX4Q9NPH5 578 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 LHX9Q9NQ69 397 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ZFP57Q9NU63 452 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 CPNE7Q9UBL6 633 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 IL20RAQ9UHF4 553 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 KLK13Q9UKR3 277 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 CES1P1Q9UKY3 287 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 PLAGL1Q9UM63 463 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ICAM5Q9UMF0 924 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 SH2B3Q9UQQ2 575 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ERVK-19Q9WJR5 959 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 CARHSP1Q9Y2V2 147 aaKnown RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 MSRB2Q9Y3D2 182 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 AK6Q9Y3D8 172 aaKnown RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 ZNF337Q9Y3M9 751 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 PCDHGA1Q9Y5H4 931 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 SIRT4Q9Y6E7 314 aaPredicted RBP7.78□□□□□ -1.16
CCDC33-209ENST00000560565 NINQ8N4C6 2090 aa7.78□□□□□ -1.16
CCDC33-209ENST00000560565 URB1O60287 2271 aaKnown RBP7.77□□□□□ -1.17
CCDC33-209ENST00000560565 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 TMEM218A2RU14 115 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 GGT3PA6NGU5 568 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 LILRA5A6NI73 299 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 EFCAB7A8K855 629 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 A8MUA0 341 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 CDC42EP2O14613 210 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 MAGEB4O15481 346 aaPredicted RBP7.77□□□□□ -1.17
CCDC33-209ENST00000560565 GLCEO94923 617 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 SLC2A10O95528 541 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 EML2O95834 649 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 CD2P06729 351 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 GP1BAP07359 652 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 ICAM2P13598 275 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 ZNF35P13682 527 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 GTF2F2P13984 249 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 MPZP25189 248 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 RFC3P40938 356 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 MEOX2P50222 304 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 ZNF136P52737 540 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 PDX1P52945 283 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 SKP1P63208 163 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 TNFRSF17Q02223 184 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 LTBQ06643 244 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 INSL4Q14641 139 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 PRRT3Q5FWE3 981 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 DCST2Q5T1A1 773 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.77□□□□□ -1.17
CCDC33-209ENST00000560565 AVPI1Q5T686 147 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 FCRL6Q6DN72 434 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 DHRS7BQ6IAN0 325 aaPredicted RBP7.77□□□□□ -1.17
CCDC33-209ENST00000560565 ZNF425Q6IV72 752 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 C11orf87Q6NUJ2 197 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 OGFOD3Q6PK18 319 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 DHRS13Q6UX07 377 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 B3GLCTQ6Y288 498 aa7.77□□□□□ -1.17
CCDC33-209ENST00000560565 USP53Q70EK8 1073 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms