RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 CRISP3P54108 245 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 BPIFB3P59826 476 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 PLP2Q04941 152 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 CKAP4Q07065 602 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 CDK5R2Q13319 367 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 DPY19L1Q2PZI1 675 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 DPPA2Q7Z7J5 298 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 LRRC18Q8N456 261 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 TRIML2Q8N7C3 387 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 ZSCAN4Q8NAM6 433 aaPredicted RBP7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 RBM15BQ8NDT2 890 aaKnown RBP7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 OR6X1Q8NH79 312 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 SLC35B4Q969S0 331 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 SLC47A1Q96FL8 570 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 POM121L2Q96KW2 1035 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 SAMD8Q96LT4 415 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 ASPNQ9BXN1 380 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 NANOGQ9H9S0 305 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 TMEM165Q9HC07 324 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 CALML5Q9NZT1 146 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 SLC17A7Q9P2U7 560 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 P2RX2Q9UBL9 471 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 RPS6KB2Q9UBS0 482 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 IFT52Q9Y366 437 aa7.46□□□□□ -1.22
RABGGTA-217ENST00000560521 LOC100509620A0A075B734 347 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 E9PBE3 544 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 TMEM178BH3BS89 294 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 TNFRSF13BO14836 293 aaPredicted RBP7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 MGRN1O60291 552 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 PIP5K1CO60331 668 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 ZNF205O95201 554 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 KRT75O95678 551 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 QDPRP09417 244 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 PGA4P0DJD7 388 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 PGA3P0DJD8 388 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 ADORA3P0DMS8 318 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 IL12AP29459 219 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 CLNS1AP54105 237 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 UFM1P61960 85 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 GNB2P62879 340 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 ALG10BQ5I7T1 473 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 PABPC1L2AQ5JQF8 200 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 GPR157Q5UAW9 335 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 Q6ZR03 302 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 SLC35D2Q76EJ3 337 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 COMTD1Q86VU5 262 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 KLBQ86Z14 1044 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 C1orf174Q8IYL3 243 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 MUC20Q8N307 709 aaPredicted RBP7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 FITM2Q8N6M3 262 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 DNAJA4Q8WW22 397 aaPredicted RBP7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 ITLN1Q8WWA0 313 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 THOC1Q96FV9 657 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 TMEM19Q96HH6 336 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 ZIM3Q96PE6 472 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 NUDT16L1Q9BRJ7 211 aaKnown RBP7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 SLC19A3Q9BZV2 496 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 C16orf95Q9H693 158 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 ARMC7Q9H6L4 198 aa7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 CGGBP1Q9UFW8 167 aaPredicted RBP7.45□□□□□ -1.22
RABGGTA-217ENST00000560521 CENPVL3A0A0U1RRI6 287 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 LOC100653049A0A140TA62 436 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 C5orf49A4QMS7 147 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 DYNC1I1O14576 645 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 ENTPD5O75356 428 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 KRT34O76011 436 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 IGHV4-59P01825 116 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 RPS2P15880 293 aaKnown RBP7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 ZNF32P17041 273 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 TNFRSF1AP19438 455 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 CPT2P23786 658 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 SERPINB5P36952 375 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 CRATP43155 626 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 IER3P46695 156 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 NME5P56597 212 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 DSTNP60981 165 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 FGF12P61328 243 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 PPP1CBP62140 327 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 HSF2Q03933 536 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 PSG7Q13046 419 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 MELKQ14680 651 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 HIST3H3Q16695 136 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 NRN1LQ496H8 165 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 PDCD4Q53EL6 469 aaKnown RBP7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 MTX3Q5HYI7 312 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 FAM91A1Q658Y4 838 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 C11orf87Q6NUJ2 197 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 ULK3Q6PHR2 472 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 RFPL4BQ6ZWI9 263 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 C17orf53Q8N3J3 647 aaPredicted RBP7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 HIPK4Q8NE63 616 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 OR5J2Q8NH18 312 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 TBC1D15Q8TC07 691 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 C10orf82Q8WW14 230 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 SSMEM1Q8WWF3 244 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 MCHR2Q969V1 340 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 ZNF566Q969W8 418 aa7.44□□□□□ -1.22
RABGGTA-217ENST00000560521 PPP1R14AQ96A00 147 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms