RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 AMBRA1Q9C0C7 1298 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 NOX3Q9HBY0 568 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 PROCRQ9UNN8 238 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 LCMT2O60294 686 aaKnown RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 MYF5P13349 255 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 TRIM23P36406 574 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 IHHQ14623 411 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 GLYATL3Q5SZD4 288 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 NKAIN3Q8N8D7 197 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 ABHD6Q9BV23 337 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 WWTR1Q9GZV5 400 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 MMP28Q9H239 520 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 KIF26BQ2KJY2 2108 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 SPTY2D1-AS1A0A0U1RR47 76 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 NCR1O76036 304 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 SNRPD2P62316 118 aaKnown RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 ATPAF1Q5TC12 328 aaPredicted RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 OR4A16Q8NH70 328 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 TSSK2Q96PF2 358 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 MFFQ9GZY8 342 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 PPA2Q9H2U2 334 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 SEMA4GQ9NTN9 838 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 DOCK9Q9BZ29 2069 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 MSTNO14793 375 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 QDPRP09417 244 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 POLR2IP36954 125 aaKnown RBP12.34□□□□□ -0.43
TRAF3-208ENST00000560371 RAB11AP62491 216 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 ACVR1Q04771 509 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 HES7Q9BYE0 225 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 PCED1AQ9H1Q7 454 aa12.34□□□□□ -0.43
TRAF3-208ENST00000560371 PCNX1Q96RV3 2341 aa12.33□□□□□ -0.43
TRAF3-208ENST00000560371 TPT1P13693 172 aaKnown RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 PTPN6P29350 595 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 GFRALQ6UXV0 394 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 SLC17A4Q9Y2C5 497 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 A0A1W2PNR3 127 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 RFPL3O75679 317 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 PLK5Q496M5 336 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 THEM4Q5T1C6 240 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 A6NHS1 94 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 CRYABP02511 175 aaKnown RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 RFC3P40938 356 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 MAP2K6P52564 334 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 SLC9A3R2Q15599 337 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 CGB2Q6NT52 195 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF529Q6P280 563 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 WFDC8Q8IUA0 241 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 TAAR9Q96RI9 348 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 LRRC61Q9BV99 259 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 ASF1BQ9NVP2 202 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 GLTPQ9NZD2 209 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 ARHGAP33O14559 1287 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF254O75437 659 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 PIAS2O75928 621 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 SELEP16581 610 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 RPL34P49207 117 aaKnown RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 CLVS2Q5SYC1 327 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 TMPRSS7Q7RTY8 843 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 PIWIL3Q7Z3Z3 882 aaKnown RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 NLRP8Q86W28 1048 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 LINC00615Q96LM1 132 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 WSB2Q9NYS7 404 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 LILRA5A6NI73 299 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 HABP2Q14520 560 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 YIF1BQ5BJH7 314 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 FAM71CQ8NEG0 241 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 KCNE4Q8WWG9 221 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 NTNG1Q9Y2I2 539 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 WDR37Q9Y2I8 494 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 TMPRSS11DO60235 418 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 HOXA1P49639 335 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 IDH3GP51553 393 aaPredicted RBP12.33□□□□□ -0.44
TRAF3-208ENST00000560371 LSAMPQ13449 338 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 DHRS13Q6UX07 377 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 ST8SIA1Q92185 356 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 PIGTQ969N2 578 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 GNB4Q9HAV0 340 aa12.33□□□□□ -0.44
TRAF3-208ENST00000560371 OR5H15A6NDH6 313 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 OR5H14A6NHG9 310 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 OR5H1A6NKK0 313 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ARR3P36575 388 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 HTD2P86397 168 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 SEMA6DQ8NFY4 1073 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 OR52I1Q8NGK6 324 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 DAZAP1Q96EP5 407 aaKnown RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 RCE1Q9Y256 329 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF705FA8MVS1 300 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 H0Y8G0 127 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 AIPO00170 330 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF705DP0CH99 300 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 ZNF705BP0CI00 300 aaPredicted RBP12.32□□□□□ -0.44
TRAF3-208ENST00000560371 TBXA2RP21731 343 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 BEST4Q8NFU0 473 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 UFSP2Q9NUQ7 469 aa12.32□□□□□ -0.44
TRAF3-208ENST00000560371 C1orf123Q9NWV4 160 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms