RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 A0A096LNT2 108 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 IMPA2O14732 288 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 FARS2O95363 451 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 F12P00748 615 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 SCG5P05408 212 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 CD14P08571 375 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 BMP4P12644 408 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 MRPS34P82930 218 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 TAF11Q15544 211 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 SGCAQ16586 387 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 ANKDD1AQ495B1 522 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 MESTQ5EB52 335 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 CLEC2AQ6UVW9 174 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 FAM122BQ7Z309 247 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 LRP11Q86VZ4 500 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 CPEB3Q8NE35 698 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 SLC30A7Q8NEW0 376 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 RASD2Q96D21 266 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 RHNO1Q9BSD3 238 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 ALG12Q9BV10 488 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 MRPL37Q9BZE1 423 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 OR51B6Q9H340 312 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 DENND2DQ9H6A0 471 aaPredicted RBP10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 SIAEQ9HAT2 523 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 SMURF2Q9HAU4 748 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 STX18Q9P2W9 335 aaKnown RBP10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 SIGLEC7Q9Y286 467 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 TMEM5Q9Y2B1 443 aa10.04□□□□□ -0.8
RABGGTA-216ENST00000560243 SLC22A23A1A5C7 686 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 FAM171A2A8MVW0 826 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 MGRN1O60291 552 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 GADD45GO95257 159 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 FAM157BP0CG42 384 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 ZNF32P17041 273 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 APEX1P27695 318 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 LAP3P28838 519 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 MNAT1P51948 309 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 SPIBQ01892 262 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 DBPQ10586 325 aaPredicted RBP10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 SLC36A2Q495M3 483 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 NRN1LQ496H8 165 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 PABPC1L2AQ5JQF8 200 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 THEM4Q5T1C6 240 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 OTPQ5XKR4 325 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 TMEM53Q6P2H8 277 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 ZER1Q7Z7L7 766 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 C10orf105Q8TEF2 133 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 RSRC1Q96IZ7 334 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 FOXN4Q96NZ1 517 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 RBP7Q96R05 134 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 SYT3Q9BQG1 590 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 IL1RAPQ9NPH3 570 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 NDE1Q9NXR1 346 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 MYEF2Q9P2K5 600 aaKnown RBP10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 GRHPRQ9UBQ7 328 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 ADAM21Q9UKJ8 722 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 CMAHPQ9Y471 501 aa10.03□□□□□ -0.8
RABGGTA-216ENST00000560243 TEX13CA0A0J9YWL9 993 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 A0A1W2PPL8 197 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 TCRBV5S2A0A599 114 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 UNC119BA6NIH7 251 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 A6NIZ1 184 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 ENTPD5O75356 428 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 NDUFB2O95178 105 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 FABP3P05413 133 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 ITGA2P17301 1181 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 PCSK6P29122 969 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 RRM2P31350 389 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 GLRXP35754 106 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 PPOXP50336 477 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 RAP1BP61224 184 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 ERVS71-1P61550 626 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 RAP1AP62834 184 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 PSG4Q00888 419 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 MS4A2Q01362 244 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 GALK2Q01415 458 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 MAD2L1BPQ15013 274 aaPredicted RBP10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 SPATS1Q496A3 300 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 FAM27BQ5VT28 67 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 FAM205BPQ63HN1 556 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 UGT2A3Q6UWM9 527 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 FOXL2NBQ6ZUU3 175 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 ZDHHC21Q8IVQ6 265 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 AKR7LQ8NHP1 331 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 FAM168AQ92567 244 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 MRPL24Q96A35 216 aaKnown RBP10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 CLPTM1LQ96KA5 538 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 ZNF570Q96NI8 536 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 TPK1Q9H3S4 243 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 EMC7Q9NPA0 242 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 NRIP3Q9NQ35 241 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 ACTR3BQ9P1U1 418 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 FBXL3Q9UKT7 428 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 AURKCQ9UQB9 309 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 SPEF1Q9Y4P9 236 aa10.02□□□□□ -0.81
RABGGTA-216ENST00000560243 LOC100509620A0A075B734 347 aa10.01□□□□□ -0.81
RABGGTA-216ENST00000560243 PRSS37A4D1T9 235 aa10.01□□□□□ -0.81
RABGGTA-216ENST00000560243 VSTM5A8MXK1 200 aa10.01□□□□□ -0.81
RABGGTA-216ENST00000560243 INAFM1C9JVW0 142 aa10.01□□□□□ -0.81
RABGGTA-216ENST00000560243 SOCS2O14508 198 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms