RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 OR2M2Q96R28 347 aa12.87□□□□□ -0.35
ZEB1-218ENST00000560196 TM9SF2Q99805 663 aa12.87□□□□□ -0.35
ZEB1-218ENST00000560196 TTYH2Q9BSA4 534 aa12.87□□□□□ -0.35
ZEB1-218ENST00000560196 NXF2Q9GZY0 626 aaKnown RBP12.87□□□□□ -0.35
ZEB1-218ENST00000560196 RNF167Q9H6Y7 350 aa12.87□□□□□ -0.35
ZEB1-218ENST00000560196 MRM2Q9UI43 246 aaKnown RBP12.87□□□□□ -0.35
ZEB1-218ENST00000560196 GNG8Q9UK08 70 aa12.87□□□□□ -0.35
ZEB1-218ENST00000560196 MSRB2Q9Y3D2 182 aa12.87□□□□□ -0.35
ZEB1-218ENST00000560196 PMF1-BGLAPU3KQ54 211 aa12.87□□□□□ -0.35
ZEB1-218ENST00000560196 PTPRZ1P23471 2315 aaPredicted RBP12.87□□□□□ -0.35
ZEB1-218ENST00000560196 PNMA8CA0A1B0GUJ8 204 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 ZNF716A6NP11 495 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 PRR32B1ATL7 298 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 H0YC42 278 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 GABRPO00591 440 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 KLK10O43240 276 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 CYTIPO60759 359 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 UPK3AO75631 287 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 GPANK1O95872 356 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 CELA3AP09093 270 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 PSKH1P11801 424 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 ZNF823P16415 610 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 RFC3P40938 356 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 EIF1AXP47813 144 aaKnown RBP12.86□□□□□ -0.35
ZEB1-218ENST00000560196 ADAM8P78325 824 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 C10orf128Q5T292 105 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 FDX2Q6P4F2 183 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 KCTD18Q6PI47 426 aaPredicted RBP12.86□□□□□ -0.35
ZEB1-218ENST00000560196 ARL9Q6T311 187 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 IGFL3Q6UXB1 125 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 TMEM91Q6ZNR0 172 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 TMEM123Q8N131 208 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 MEIOBQ8N635 442 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 NEIL3Q8TAT5 605 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 ABTB1Q969K4 478 aaPredicted RBP12.86□□□□□ -0.35
ZEB1-218ENST00000560196 TMEM203Q969S6 136 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 RNF166Q96A37 237 aaPredicted RBP12.86□□□□□ -0.35
ZEB1-218ENST00000560196 SMIM19Q96E16 107 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 OR8B4Q96RC9 309 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 SCNM1Q9BWG6 230 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 SLC6A15Q9H2J7 730 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 GLTPQ9NZD2 209 aa12.86□□□□□ -0.35
ZEB1-218ENST00000560196 PCDHGA9Q9Y5G4 932 aaKnown RBP12.86□□□□□ -0.35
ZEB1-218ENST00000560196 IGKV3D-15A0A087WSY6 115 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 IGHV3-15A0A0B4J1V0 119 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 SC5DO75845 299 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 SERPINA3P01011 423 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 CSNK1A1P48729 337 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 ROR2Q01974 943 aaKnown RBP12.85□□□□□ -0.35
ZEB1-218ENST00000560196 MOGQ16653 247 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 C22orf42Q6IC83 251 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 LRFN4Q6PJG9 635 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 DEGS2Q6QHC5 323 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 PAMR1Q6UXH9 720 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 UBQLNLQ8IYU4 475 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 TEX19Q8NA77 164 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 MCHR2Q969V1 340 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 TMEM45BQ96B21 275 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 ZNF385AQ96PM9 386 aaKnown RBP12.85□□□□□ -0.35
ZEB1-218ENST00000560196 TTTY10Q9BZA0 68 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 KCNN2Q9H2S1 579 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 MMP27Q9H306 513 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 ACOXLQ9NUZ1 547 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 DKK4Q9UBT3 224 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 FOXD3Q9UJU5 478 aaPredicted RBP12.85□□□□□ -0.35
ZEB1-218ENST00000560196 FLVCR1Q9Y5Y0 555 aa12.85□□□□□ -0.35
ZEB1-218ENST00000560196 ALPK2Q86TB3 2170 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 ARPC4-TTLL3A0A0A6YYG9 625 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 MAGEB4O15481 346 aaPredicted RBP12.84□□□□□ -0.35
ZEB1-218ENST00000560196 LRRTM2O43300 516 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 TMCC2O75069 709 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 ZNF254O75437 659 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 IGHG3P01860 377 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 QDPRP09417 244 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 SPARCP09486 303 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 INHBBP09529 407 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 FREM3P0C091 2139 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 OR8G3PP0DMU2 310 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 EDNRAP25101 427 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 SOX6P35712 828 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 PEX19P40855 299 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 GDI2P50395 445 aaKnown RBP12.84□□□□□ -0.35
ZEB1-218ENST00000560196 DYNC1I2Q13409 638 aaKnown RBP12.84□□□□□ -0.35
ZEB1-218ENST00000560196 ZNF404Q494X3 552 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 LIPNQ5VXI9 398 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 RPTNQ6XPR3 784 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 C20orf196Q8IYI0 205 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 ZNF679Q8IYX0 411 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 ZADH2Q8N4Q0 377 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 YIPF7Q8N8F6 280 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 OR10H5Q8NGA6 315 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 OR52N5Q8NH56 324 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 MCFD2Q8NI22 146 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 ABHD4Q8TB40 342 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 C11orf40Q8WZ69 217 aa12.84□□□□□ -0.35
ZEB1-218ENST00000560196 PHYHIPQ92561 330 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms