RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TACR2P21452 398 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 HOXD9P28356 352 aaPredicted RBP17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 DHPSP49366 369 aaPredicted RBP17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 MRPS11P82912 194 aaKnown RBP17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 GUCA2AQ02747 115 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 GAGE1Q13065 139 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 SLC10A1Q14973 349 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 TOMM34Q15785 309 aaPredicted RBP17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 TP53I3Q53FA7 332 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 NAXEQ8NCW5 288 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 SPPL3Q8TCT6 385 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 MR1Q95460 341 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 SMIM19Q96E16 107 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 CCNL2Q96S94 520 aaPredicted RBP17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 SLC6A16Q9GZN6 736 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 IL21Q9HBE4 155 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 MMP24Q9Y5R2 645 aa17.43■□□□□ 0.38
SEMA4B-215ENST00000560089 OR1F1O43749 312 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BKO60814 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 PTBP3O95758 552 aaKnown RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BJP06899 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 TMEM11P17152 192 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BOP23527 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BBP33778 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BDP58876 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BCP62807 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 SHHQ15465 462 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST2H2BEQ16778 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 IER5LQ5T953 404 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 PRPF38BQ5VTL8 546 aaKnown RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 ZNF620Q6ZNG0 422 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BHQ93079 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 KISS1RQ969F8 398 aaPredicted RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 GAL3ST4Q96RP7 486 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BNQ99877 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 HIST1H2BMQ99879 126 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 SYT4Q9H2B2 425 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 IL17BQ9UHF5 180 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 ZFP37Q9Y6Q3 630 aaPredicted RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 CCDC187A0A096LP49 1063 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 SLC5A10A0PJK1 596 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 TMEM235A6NFC5 223 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 GAPDHSO14556 408 aaPredicted RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 SPARCP09486 303 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 KIR3DL2P43630 455 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 RPS11P62280 158 aaKnown RBP eCLIP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 SMAD3P84022 425 aaKnown RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 MAJINQ3KP22 176 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 STEAP1BQ6NZ63 245 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 BTNL8Q6UX41 500 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 THOC6Q86W42 341 aaKnown RBP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 ZNF227Q86WZ6 799 aa17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.42■□□□□ 0.38
SEMA4B-215ENST00000560089 A0A1W2PPC1 479 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 ZNF724A8MTY0 619 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 EEF1E1-BLOC1S5C9J1V9 151 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 ADAP1O75689 374 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 PLGP00747 810 aaPredicted RBP17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 F11P03951 625 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 NDUFV2P19404 249 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 ID4P47928 161 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 TMEM35AQ53FP2 167 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 MMP21Q8N119 569 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 MRPL43Q8N983 215 aaKnown RBP17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 WDR92Q96MX6 357 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 M0R143 59 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 LRP3O75074 770 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 CTSLP07711 333 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 LIPCP11150 499 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 RPS23P62266 143 aaKnown RBP17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 RAB1AP62820 205 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 CDK5R1Q15078 307 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 ISXQ2M1V0 245 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 THNSL2Q86YJ6 484 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 NPRL2Q8WTW4 380 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 NTNG2Q96CW9 530 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 PDCD1LG2Q9BQ51 273 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 MRPS18CQ9Y3D5 142 aaKnown RBP17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 HDGFL3Q9Y3E1 203 aa17.41■□□□□ 0.38
SEMA4B-215ENST00000560089 ANAPC1Q9H1A4 1944 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 CPSF4LA6NMK7 179 aaKnown RBP17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 F5H5T6 163 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 EPPINO95925 133 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 CKMP06732 381 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 HKR1P10072 659 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 CALCBP10092 127 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 NR2F1P10589 423 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 HTR2CP28335 458 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 CCR2P41597 374 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 DMRTA1Q5VZB9 504 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 FAM71E1Q6IPT2 247 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 LILRA6Q6PI73 481 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 TRAPPC5Q8IUR0 188 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 ASB11Q8WXH4 323 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 ZNF385AQ96PM9 386 aaKnown RBP17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 TRBV2A0A0J9YWF9 115 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 FOXE1O00358 373 aaPredicted RBP17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 LDLRAD4O15165 306 aa17.4■□□□□ 0.38
SEMA4B-215ENST00000560089 OR8U9P0C7N5 309 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms