RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 NUP37Q8NFH4 326 aa12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 FANK1Q8TC84 345 aa12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 COX4I2Q96KJ9 171 aa12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 RBP7Q96R05 134 aa12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 BDH2Q9BUT1 245 aa12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 DENND2DQ9H6A0 471 aaPredicted RBP12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 PRPF19Q9UMS4 504 aaKnown RBP12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 IER3IP1Q9Y5U9 82 aa12.82□□□□□ -0.36
RABGGTA-211ENST00000559850 CHD3Q12873 2000 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SLC22A23A1A5C7 686 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 A6NIZ1 184 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SERPINA5P05154 406 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 MMP7P09237 267 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 FAM157BP0CG42 384 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 FOSL1P15407 271 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 ZNF32P17041 273 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 NPR2P20594 1047 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 NR4A1P22736 598 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 LAP3P28838 519 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 NUDT6P53370 316 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SMIM11AP58511 58 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 RAP1BP61224 184 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SNRPD2P62316 118 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 RAP1AP62834 184 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 MRPS34P82930 218 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 KRR1Q13601 381 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 RAB35Q15286 201 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SLC36A2Q495M3 483 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 PABPC1L2AQ5JQF8 200 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 THEM4Q5T1C6 240 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 FAM205BPQ63HN1 556 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 UGT2A3Q6UWM9 527 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 ZCCHC24Q8N2G6 241 aaKnown RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 ZNF525Q8N782 197 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SLC30A7Q8NEW0 376 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 OR9Q2Q8NGE9 314 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 AKR7LQ8NHP1 331 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SORCS2Q96PQ0 1159 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 VRK1Q99986 396 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 RERGLQ9H628 205 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SIAEQ9HAT2 523 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 SMURF2Q9HAU4 748 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 EMC7Q9NPA0 242 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 KRCC1Q9NPI7 259 aaPredicted RBP12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 TMCC3Q9ULS5 477 aa12.81□□□□□ -0.36
RABGGTA-211ENST00000559850 TMEM129A0AVI4 362 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 H7C417 338 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 TNFRSF11BO00300 401 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 XKRYO14609 159 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 MGRN1O60291 552 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 LY6G6DO95868 133 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 APEX1P27695 318 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 ERFP50548 548 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 GALK2Q01415 458 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 PGBD2Q6P3X8 592 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 SMARCD3Q6STE5 483 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 CLEC9AQ6UXN8 241 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 PTCHD4Q6ZW05 846 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 CPEB3Q8NE35 698 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 IL17RDQ8NFM7 739 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 OR4C15Q8NGM1 316 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 SLC7A6OSQ96CW6 309 aaPredicted RBP12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 ASB9Q96DX5 294 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 SAMD8Q96LT4 415 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 SYT3Q9BQG1 590 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 C1orf21Q9H246 121 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 OR52D1Q9H346 318 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 MUC13Q9H3R2 512 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 EGLN3Q9H6Z9 239 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 ZNF442Q9H7R0 627 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 CCNB1IP1Q9NPC3 277 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 NRIP3Q9NQ35 241 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 LYVE1Q9Y5Y7 322 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 PMF1-BGLAPU3KQ54 211 aa12.8□□□□□ -0.36
RABGGTA-211ENST00000559850 IGHV4-30-2A0A087WSY4 118 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 PRSS37A4D1T9 235 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 B9A039 149 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 ACOT8O14734 319 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 GYG2O15488 501 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 GPANK1O95872 356 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 CTLA4P16410 223 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 FPR3P25089 353 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 SDHAP31040 664 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 CDKN2AP42771 156 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 MAGEA2P43356 314 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 GSSP48637 474 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 ERVS71-1P61550 626 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 HSF2Q03933 536 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 EFNB3Q15768 340 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 NRN1LQ496H8 165 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 MTX3Q5HYI7 312 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 DPY19L2P2Q6ZN68 376 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 DNM1P46Q6ZS02 220 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 BIVMQ86UB2 503 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 LRP11Q86VZ4 500 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 GNPDA2Q8TDQ7 276 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 LRGUKQ96M69 825 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 TSSK2Q96PF2 358 aa12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 ERMAPQ96PL5 475 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-211ENST00000559850 GPX7Q96SL4 187 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms