RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 APH1AQ96BI3 265 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 C8orf76Q96K31 380 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 NAPGQ99747 312 aaPredicted RBP2.73□□□□□ -1.97
SPG11-218ENST00000559754 KLHDC3Q9BQ90 382 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 CHID1Q9BWS9 393 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 MAP1LC3CQ9BXW4 147 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 SELENOIQ9C0D9 397 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 HDHD2Q9H0R4 259 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 ZBP1Q9H171 429 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 GOLPH3Q9H4A6 298 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 RETNQ9HD89 108 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 OR1A1Q9P1Q5 309 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 ZNF229Q9UJW7 825 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 RCL1Q9Y2P8 373 aaKnown RBP2.73□□□□□ -1.97
SPG11-218ENST00000559754 JCADQ9P266 1359 aa2.73□□□□□ -1.97
SPG11-218ENST00000559754 IGHV1OR21-1A0A087WYE8 117 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SMIM28A0A1B0GU29 152 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 TRPC5OSA6NMA1 111 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 DHRS7CA6NNS2 312 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 LYRM9A8MSI8 78 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SCAMP2O15127 329 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 MBTPS2O43462 519 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 NIPSNAP2O75323 286 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ZMPSTE24O75844 475 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 LCA5LO95447 670 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 LY6G6DO95868 133 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 CST4P01036 141 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SERPINA5P05154 406 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 KLK1P06870 262 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 STSP08842 583 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 NQO2P16083 231 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 TCN1P20061 433 aaPredicted RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 IVDP26440 423 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 IL12BP29460 328 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SHMT2P34897 504 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 DRD3P35462 400 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 DEKP35659 375 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 CRATP43155 626 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 KIR2DS4P43632 304 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SLC26A2P50443 739 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 STXBP1P61764 594 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 UBE2IP63279 158 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 STX3Q13277 289 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SERTAD2Q14140 314 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SLC10A1Q14973 349 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 TRMT5Q32P41 509 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 PTPN20Q4JDL3 420 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 PAN3Q58A45 887 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 ZNF506Q5JVG8 444 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 MBOAT1Q6ZNC8 495 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ZNF621Q6ZSS3 439 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 LINC00336Q6ZUF6 198 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 HIPK1Q86Z02 1210 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 KRTAP11-1Q8IUC1 163 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SLC22A18ASQ8N1D0 253 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 PRELID2Q8N945 189 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ZNF557Q8N988 423 aaPredicted RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 ZNF740Q8NDX6 193 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ITFG1Q8TB96 612 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ITLN1Q8WWA0 313 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 SMARCD2Q92925 531 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 DUS3LQ96G46 650 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 PGLYRP4Q96LB8 373 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ZIM3Q96PE6 472 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 FRMD8P1Q9BZ68 369 aaPredicted RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 SIAEQ9HAT2 523 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 PATZ1Q9HBE1 687 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 MRPL47Q9HD33 250 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 ZNF275Q9NSD4 429 aaPredicted RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 CLN6Q9NWW5 311 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 STMN3Q9NZ72 180 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 NYAP2Q9P242 653 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 DPM3Q9P2X0 92 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 MTRF1LQ9UGC7 380 aaKnown RBP2.72□□□□□ -1.97
SPG11-218ENST00000559754 DCDC2Q9UHG0 476 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 RSPH14Q9UHP6 348 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 GGA2Q9UJY4 613 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ING4Q9UNL4 249 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 ATP6V1DQ9Y5K8 247 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 CNTNAP1P78357 1384 aa2.72□□□□□ -1.97
SPG11-218ENST00000559754 PHF3Q92576 2039 aaKnown RBP2.71□□□□□ -1.98
SPG11-218ENST00000559754 MYO3BQ8WXR4 1341 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 POGZQ7Z3K3 1410 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 IGLV3-22A0A075B6J6 115 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 IGKV1D-8A0A087WSZ0 117 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 GLYATL1P3A0A0U1RQE8 302 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 TSPAN11A1L157 253 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 EFCAB7A8K855 629 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 HCRTR1O43613 425 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 CALUO43852 315 aaPredicted RBP2.71□□□□□ -1.98
SPG11-218ENST00000559754 SCN2BO60939 215 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 ENTPD5O75356 428 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 EIF3GO75821 320 aaKnown RBP eCLIP2.71□□□□□ -1.98
SPG11-218ENST00000559754 HBE1P02100 147 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 RPN2P04844 631 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 RBMY1CP0DJD4 496 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 LAMP1P11279 417 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 CMA1P23946 247 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 HTR2CP28335 458 aa2.71□□□□□ -1.98
SPG11-218ENST00000559754 AQP2P41181 271 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms