RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 TSSK2Q96PF2 358 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 B3GAT1Q9P2W7 334 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 ING1Q9UK53 422 aaPredicted RBP14.68□□□□□ -0.06
TPM1-219ENST00000559397 NOX1Q9Y5S8 564 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 LOC102725191A0A1B0GVB3 256 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 A6NIZ1 184 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 H7C1C5 153 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 DCTN6O00399 190 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 BCL10O95999 233 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 LALBAP00709 142 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 PLGP00747 810 aaPredicted RBP14.68□□□□□ -0.06
TPM1-219ENST00000559397 DAP3P51398 398 aaKnown RBP14.68□□□□□ -0.06
TPM1-219ENST00000559397 RAP1BP61224 184 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 LSM3P62310 102 aaKnown RBP14.68□□□□□ -0.06
TPM1-219ENST00000559397 LCN6P62502 163 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 RAP1AP62834 184 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 BDH1Q02338 343 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 FAM205BPQ63HN1 556 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 ZBTB46Q86UZ6 589 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 RPRMLQ8N4K4 120 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 ASB10Q8WXI3 467 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 WNT2BQ93097 391 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 SYT4Q9H2B2 425 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 RASD1Q9Y272 281 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 FKBP7Q9Y680 259 aa14.68□□□□□ -0.06
TPM1-219ENST00000559397 A0A1W2PQL4 384 aaPredicted RBP14.67□□□□□ -0.06
TPM1-219ENST00000559397 SLC22A23A1A5C7 686 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 ZNF716A6NP11 495 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 VAMP5O95183 116 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 UGT2B10P36537 528 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 CA7P43166 264 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 CRYBB2P43320 205 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 LIPKQ5VXJ0 399 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 C3P1Q6ZMU1 363 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 GDPGP1Q6ZNW5 385 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 C9orf106Q8NAJ2 232 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 OR6K6Q8NGW6 343 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 NDNFQ8TB73 568 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 ABHD3Q8WU67 409 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 TBX5Q99593 518 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 PRRG4Q9BZD6 226 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 MARCH7Q9H992 704 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 ISG20L2Q9H9L3 353 aaKnown RBP14.67□□□□□ -0.06
TPM1-219ENST00000559397 RNF122Q9H9V4 155 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 SRA1Q9HD15 236 aaKnown RBP14.67□□□□□ -0.06
TPM1-219ENST00000559397 KLHL13Q9P2N7 655 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 OSGIN2Q9Y236 505 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 SF3B6Q9Y3B4 125 aaKnown RBP14.67□□□□□ -0.06
TPM1-219ENST00000559397 MED12LQ86YW9 2145 aa14.67□□□□□ -0.06
TPM1-219ENST00000559397 PHF3Q92576 2039 aaKnown RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 MBD3L4A6NDZ8 208 aaPredicted RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 MBD3L3A6NE82 208 aaPredicted RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 MBD3L5A6NJ08 208 aaPredicted RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 AKAP8O43823 692 aaKnown RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 SELENOFO60613 162 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 GPX5O75715 221 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 IFNGR1P15260 489 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 CAPZA2P47755 286 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 RUNX1T1Q06455 604 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 SLC17A1Q14916 467 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 POU4F3Q15319 338 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 TMEM225Q6GV28 225 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 SLC35D2Q76EJ3 337 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 P4HA3Q7Z4N8 544 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 SLC35F2Q8IXU6 374 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 TIGD4Q8IY51 512 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 MBD3L2Q8NHZ7 208 aaPredicted RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 DYNC2LI1Q8TCX1 351 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 SMAP2Q8WU79 429 aaPredicted RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 UFD1Q92890 307 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 DOCK7Q96N67 2140 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 OXGR1Q96P68 337 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 MYCBPQ99417 103 aaPredicted RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 SF3B5Q9BWJ5 86 aaKnown RBP14.66□□□□□ -0.06
TPM1-219ENST00000559397 NUAK2Q9H093 628 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 BABAM2Q9NXR7 383 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 B9D1Q9UPM9 204 aa14.66□□□□□ -0.06
TPM1-219ENST00000559397 NBASA2RRP1 2371 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 IGLV1-36A0A0B4J1U3 117 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 FAM171A2A8MVW0 826 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 AHCYL1O43865 530 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 MT-ND5P03915 603 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 FCGR2AP12318 317 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 PSMA1P25786 263 aaKnown RBP14.65□□□□□ -0.06
TPM1-219ENST00000559397 NAA10P41227 235 aaPredicted RBP14.65□□□□□ -0.06
TPM1-219ENST00000559397 HSF2Q03933 536 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 RASGEF1BQ0VAM2 473 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 MELKQ14680 651 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 RNPS1Q15287 305 aaKnown RBP14.65□□□□□ -0.06
TPM1-219ENST00000559397 LYPD4Q6UWN0 246 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 SSX6Q7RTT6 188 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 SLC16A9Q7RTY1 509 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 ZNF511Q8NB15 262 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 CHCHD6Q9BRQ6 235 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 TTYH2Q9BSA4 534 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 CENPOQ9BU64 300 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 SH3BGRL2Q9UJC5 107 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 STUB1Q9UNE7 303 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 IGKV3D-15A0A087WSY6 115 aa14.65□□□□□ -0.06
TPM1-219ENST00000559397 TRGV8A0A0C4DH27 118 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms