RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 SSX4O60224 188 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ATP5HO75947 161 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 DIRAS1O95057 198 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CCNB2O95067 398 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 SLC2A10O95528 541 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CD8AP01732 235 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 IGHMP01871 453 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 MT-ND5P03915 603 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CELA3BP08861 270 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CSF3P09919 207 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 APEHP13798 732 aaKnown RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 ZNF14P17017 642 aaPredicted RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 GSTM3P21266 225 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 MSR1P21757 451 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CCNOP22674 350 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 NR4A1P22736 598 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 FPR3P25089 353 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 STOMP27105 288 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CRABP1P29762 137 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CALCRP30988 508 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 SLC6A6P31641 620 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CDAP32320 146 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 OMPP47874 163 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 LIMS1P48059 325 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 EVX1P49640 407 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 PPOXP50336 477 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ARHGDIAP52565 204 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ZNF133P52736 654 aaPredicted RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 EFNA4P52798 201 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 RIPPLY3P57055 190 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ERVK-25P63136 954 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 GLO1Q04760 184 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 TRAP1Q12931 704 aaKnown RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 SNTB2Q13425 540 aaKnown RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 GK3PQ14409 553 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 EFNB3Q15768 340 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ADIPOQQ15848 244 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 MOGQ16653 247 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 TBC1D28Q2M2D7 210 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 C10orf128Q5T292 105 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 FAM27BQ5VT28 67 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 LCN8Q6JVE9 175 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 KRT80Q6KB66 452 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 RPL13AP3Q6NVV1 102 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 PGM2L1Q6PCE3 622 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 DNM1P34Q6PK57 102 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 SMARCD3Q6STE5 483 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CLEC9AQ6UXN8 241 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 RINLQ6ZS11 566 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 IGFN1Q86VF2 1251 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 JAZF1Q86VZ6 243 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 SKA3Q8IX90 412 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 FAM86B1Q8N7N1 296 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ICA1LQ8NDH6 482 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ZNF540Q8NDQ6 660 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 SLC30A7Q8NEW0 376 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 FANK1Q8TC84 345 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 C11orf40Q8WZ69 217 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 FAM168AQ92567 244 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 HDAC2Q92769 488 aaKnown RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 MRPL24Q96A35 216 aaKnown RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 FBXO17Q96EF6 278 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 RSRC1Q96IZ7 334 aaKnown RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 DHRS1Q96LJ7 313 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ZNF570Q96NI8 536 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 TSPAN32Q96QS1 320 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 GPX7Q96SL4 187 aaPredicted RBP3.79□□□□□ -1.8
SNX1-205ENST00000559339 WACQ9BTA9 647 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 IFT27Q9BW83 186 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CDADC1Q9BWV3 514 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 BCL2L14Q9BZR8 327 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 MS4A5Q9H3V2 200 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 RERGLQ9H628 205 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 YY1AP1Q9H869 796 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 REEP1Q9H902 201 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 CDH20Q9HBT6 801 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 DYNLRB1Q9NP97 96 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 NRIP3Q9NQ35 241 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 B3GNT2Q9NY97 397 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 TAS2R1Q9NYW7 299 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 IL20RAQ9UHF4 553 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 DUSP13Q9UII6 198 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ADAM18Q9Y3Q7 739 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 TIMM10BQ9Y5J6 103 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 IER3IP1Q9Y5U9 82 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 HIVEP1P15822 2718 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 ALPK2Q86TB3 2170 aa3.79□□□□□ -1.8
SNX1-205ENST00000559339 DSCAMO60469 2012 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TEP1Q99973 2627 aaKnown RBP3.78□□□□□ -1.8
SNX1-205ENST00000559339 PRR14LQ5THK1 2151 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TEX13CA0A0J9YWL9 993 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 A0A1W2PPW3 197 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 LOC390937A0A1W2PQ73 354 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 PLSCR5A0PG75 271 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 C5orf49A4QMS7 147 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 ZNF503-AS2A6NEH8 195 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TRIM64A6NGJ6 449 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 TRIM64BA6NI03 449 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 AQP12BA6NM10 295 aa3.78□□□□□ -1.8
SNX1-205ENST00000559339 M0R233 179 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms