RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 MGAT4BQ9UQ53 548 aa16.23■□□□□ 0.19
CASC4-209ENST00000559222 LAMP3Q9UQV4 416 aa16.23■□□□□ 0.19
CASC4-209ENST00000559222 IGHV2OR16-5A0A0B4J2B6 119 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 XKRYO14609 159 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 MGRN1O60291 552 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 CD8AP01732 235 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 MMP7P09237 267 aaPredicted RBP16.22■□□□□ 0.19
CASC4-209ENST00000559222 HIST1H1CP16403 213 aaKnown RBP16.22■□□□□ 0.19
CASC4-209ENST00000559222 PRKACGP22612 351 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 ARR3P36575 388 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 RAB1AP62820 205 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 MRPS34P82930 218 aaKnown RBP16.22■□□□□ 0.19
CASC4-209ENST00000559222 SGCAQ16586 387 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 THEM4Q5T1C6 240 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 SLC35F1Q5T1Q4 408 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 C1QTNF12Q5T7M4 302 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 GPR139Q6DWJ6 353 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 RASSF6Q6ZTQ3 369 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 FAM169BQ8N8A8 192 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 OR4Q3Q8NH05 313 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 OR4K13Q8NH42 304 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 GIPC3Q8TF64 312 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 SMAP2Q8WU79 429 aaPredicted RBP16.22■□□□□ 0.19
CASC4-209ENST00000559222 FBXO17Q96EF6 278 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 RBP7Q96R05 134 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 FEVQ99581 238 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 DGCR6LQ9BY27 220 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 NDEL1Q9GZM8 345 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 MMADHCQ9H3L0 296 aaPredicted RBP16.22■□□□□ 0.19
CASC4-209ENST00000559222 RERGLQ9H628 205 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 EMC7Q9NPA0 242 aa16.22■□□□□ 0.19
CASC4-209ENST00000559222 VSX1Q9NZR4 365 aaPredicted RBP16.22■□□□□ 0.19
CASC4-209ENST00000559222 PDP1Q9P0J1 537 aaPredicted RBP16.22■□□□□ 0.19
CASC4-209ENST00000559222 BHLHE40O14503 412 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 GNGT2O14610 69 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 UBL3O95164 117 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 MPZL1O95297 269 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 LAP3P28838 519 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 RPS6KA3P51812 740 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 ENDOGQ14249 297 aaKnown RBP16.21■□□□□ 0.19
CASC4-209ENST00000559222 C3orf36Q3SXR2 165 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 LEG1Q6P5S2 330 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 SLC16A14Q7RTX9 510 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 CCDC36Q8IYA8 594 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 PAQR4Q8N4S7 273 aaPredicted RBP16.21■□□□□ 0.19
CASC4-209ENST00000559222 LINC00471Q8N535 108 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 SDR9C7Q8NEX9 313 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 NANOS1Q8WY41 292 aaKnown RBP16.21■□□□□ 0.19
CASC4-209ENST00000559222 NMNAT3Q96T66 252 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 NUAK2Q9H093 628 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 TBC1D23Q9NUY8 699 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 DNAJB9Q9UBS3 223 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 REV1Q9UBZ9 1251 aa16.21■□□□□ 0.19
CASC4-209ENST00000559222 EBAG9O00559 213 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 ARPC3O15145 178 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 SLC16A7O60669 478 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 RAB36O95755 333 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 CCL2P13500 99 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 APEHP13798 732 aaKnown RBP16.2■□□□□ 0.18
CASC4-209ENST00000559222 ZNF32P17041 273 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 CDKN1AP38936 164 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 MSMPQ1L6U9 139 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 IQCF1Q8N6M8 205 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 FOXC2Q99958 501 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 DHRS9Q9BPW9 319 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 TRAF4Q9BUZ4 470 aaPredicted RBP16.2■□□□□ 0.18
CASC4-209ENST00000559222 CXXC4Q9H2H0 198 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 SIAEQ9HAT2 523 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 POLE4Q9NR33 117 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 IL20Q9NYY1 176 aa16.2■□□□□ 0.18
CASC4-209ENST00000559222 COA3Q9Y2R0 106 aaPredicted RBP16.2■□□□□ 0.18
CASC4-209ENST00000559222 OR6C68A6NDL8 312 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 E2F6O75461 281 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 CIB2O75838 187 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 FARS2O95363 451 aaKnown RBP16.19■□□□□ 0.18
CASC4-209ENST00000559222 CRYAAP02489 173 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.19■□□□□ 0.18
CASC4-209ENST00000559222 KPNB1Q14974 876 aaKnown RBP16.19■□□□□ 0.18
CASC4-209ENST00000559222 NRN1LQ496H8 165 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 C11orf71Q6IPW1 123 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 VHLLQ6RSH7 139 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 AMIGO2Q86SJ2 522 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 ADCK1Q86TW2 530 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 CYB561A3Q8NBI2 242 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 CPEB3Q8NE35 698 aaKnown RBP16.19■□□□□ 0.18
CASC4-209ENST00000559222 AKR7LQ8NHP1 331 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 PERPQ96FX8 193 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 ZNF416Q9BWM5 594 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 TSSK6Q9BXA6 273 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 RNF121Q9H920 327 aa16.19■□□□□ 0.18
CASC4-209ENST00000559222 BEX4Q9NWD9 120 aaPredicted RBP16.19■□□□□ 0.18
CASC4-209ENST00000559222 USF3Q68DE3 2245 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 IGLV1-36A0A0B4J1U3 117 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 ARRDC5A6NEK1 342 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 FAM171A2A8MVW0 826 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 OVOL3O00110 214 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 NDUFS7O75251 213 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 NR2C1P13056 603 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 ZNF35P13682 527 aa16.18■□□□□ 0.18
CASC4-209ENST00000559222 TTKP33981 857 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms