RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 BLVRAP53004 296 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 CDH11P55287 796 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 FOXG1P55316 489 aaPredicted RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 UBE2NP61088 152 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 SNRPGP62308 76 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 FAM27E3Q08E93 113 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 DBPQ10586 325 aaPredicted RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 APOFQ13790 326 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 SGCAQ16586 387 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC35D3Q5M8T2 416 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF362Q5T0B9 420 aaPredicted RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 SFRP5Q5T4F7 317 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF691Q5VV52 312 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 MEDAGQ5VYS4 303 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 NXNL2Q5VZ03 156 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 OR7E24Q6IFN5 339 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ANKRD16Q6P6B7 361 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 STAC2Q6ZMT1 411 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 THAP5Q7Z6K1 395 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ZBTB46Q86UZ6 589 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 GLB1L2Q8IW92 636 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ENTHD1Q8IYW4 607 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 OR6V1Q8N148 313 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF433Q8N7K0 673 aaPredicted RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 C1orf162Q8NEQ5 155 aaPredicted RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 STEAP2Q8NFT2 490 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 OR51L1Q8NGJ5 315 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 OR1K1Q8NGR3 316 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 NANOS1Q8WY41 292 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 TFAP2CQ92754 450 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 RFKQ969G6 155 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF837Q96EG3 531 aaPredicted RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 Q96MT0 163 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 MUS81Q96NY9 551 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 FOXN4Q96NZ1 517 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 DDOQ99489 341 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 HCAR1Q9BXC0 346 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 HDHD5Q9BXW7 423 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 NMNAT2Q9BZQ4 307 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 KCNN2Q9H2S1 579 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 NELFAQ9H3P2 528 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 RASSF1Q9NS23 344 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 TMEM38BQ9NVV0 291 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 CLN6Q9NWW5 311 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 DNAJC27Q9NZQ0 273 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 RAB26Q9ULW5 256 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 MOKQ9UQ07 419 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 UTP20O75691 2785 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 SPTBN1Q01082 2364 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 INTS1Q8N201 2190 aaKnown RBP5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 ARHGAP21Q5T5U3 1957 aa5.8□□□□□ -1.48
CHRNA3-204ENST00000559002 USP9YO00507 2555 aaPredicted RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 A0A096LPE4 126 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 A0A1W2PPZ6 126 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 TVP23AA6NH52 213 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 E9PQ18 207 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 WNT11O96014 354 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 GNAO1P09471 354 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 OR8G3PP0DMU2 310 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 CLUP10909 449 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF823P16415 610 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 MSR1P21757 451 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 GSTT1P30711 240 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 UGT2B10P36537 528 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 MRPS34P82930 218 aaKnown RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 SORDQ00796 357 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 MAD2L1BPQ15013 274 aaPredicted RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 CDSNQ15517 529 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 TSC22D1Q15714 1073 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 ETFDHQ16134 617 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 GABRA6Q16445 453 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 OCLNQ16625 522 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 TBRG1Q3YBR2 411 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 FBXL19-AS1Q494R0 122 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC36A2Q495M3 483 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 NRN1LQ496H8 165 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 HIKESHIQ53FT3 197 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 AADACL4Q5VUY2 407 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 KRT80Q6KB66 452 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 USP51Q70EK9 711 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 MEPCEQ7L2J0 689 aaKnown RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC16A14Q7RTX9 510 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 BCDIN3DQ7Z5W3 292 aaKnown RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 ERI1Q8IV48 349 aaKnown RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 CCDC36Q8IYA8 594 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 C17orf78Q8N4C9 275 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC22A24Q8N4F4 322 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 BBS1Q8NFJ9 593 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 RHOXF1Q8NHV9 184 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 HTRA1Q92743 480 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 BCL2L2Q92843 193 aaPredicted RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 UBE2FQ969M7 185 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 S100PBPQ96BU1 408 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 MUCL1Q96DR8 90 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 ZMYND19Q96E35 227 aaPredicted RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 CNBD2Q96M20 576 aa5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF582Q96NG8 517 aaPredicted RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 CNN2Q99439 309 aaKnown RBP5.79□□□□□ -1.48
CHRNA3-204ENST00000559002 USB1Q9BQ65 265 aaKnown RBP5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms