RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 CMC2Q9NRP2 79 aa10.9□□□□□ -0.66
GABPB1-208ENST00000558970 SMPD3Q9NY59 655 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-208ENST00000558970 VSX1Q9NZR4 365 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-208ENST00000558970 PLEKHB1Q9UF11 243 aaPredicted RBP10.9□□□□□ -0.66
GABPB1-208ENST00000558970 DOPEY1Q5JWR5 2465 aa10.9□□□□□ -0.67
GABPB1-208ENST00000558970 CENPBD1B2RD01 187 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 PRR23D1E9PI22 279 aaPredicted RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 RPL36A-HNRNPH2H7BZ11 118 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 PRKYO43930 277 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 KHDRBS3O75525 346 aaKnown RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 CLIC3O95833 236 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 HMGN1P05114 100 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 PRR23D2P0DMB1 279 aaPredicted RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 CD79AP11912 226 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 PAICSP22234 425 aaKnown RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 PTDSS1P48651 473 aaKnown RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 UBE2NP61088 152 aaKnown RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 RPS7P62081 194 aaKnown RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 PIGFQ07326 219 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 RIPK1Q13546 671 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF362Q5T0B9 420 aaPredicted RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 C10orf128Q5T292 105 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 SLX4IPQ5VYV7 408 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 C12orf73Q69YU5 71 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 ANKRD16Q6P6B7 361 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 CXXC5Q7LFL8 322 aaKnown RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 CPOQ8IVL8 374 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 OR6V1Q8N148 313 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 TCEANCQ8N8B7 351 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 BBS1Q8NFJ9 593 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 ZNRF4Q8WWF5 429 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 OR51V1Q9H2C8 321 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 VCXQ9H320 206 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 NELFAQ9H3P2 528 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 HINT3Q9NQE9 182 aaKnown RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 TMEM38BQ9NVV0 291 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 CRIM1Q9NZV1 1036 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 AASSQ9UDR5 926 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 B9D1Q9UPM9 204 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 UGT2A1Q9Y4X1 527 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 GMPPBQ9Y5P6 360 aa10.89□□□□□ -0.67
GABPB1-208ENST00000558970 KLF2Q9Y5W3 355 aaPredicted RBP10.89□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF503-AS2A6NEH8 195 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 TVP23AA6NH52 213 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 DLGAP1O14490 977 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 TLX2O43763 284 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-208ENST00000558970 HLA-HP01893 362 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 SCG5P05408 212 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 SPI1P17947 270 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 LAP3P28838 519 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 CRABP1P29762 137 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 RPS27P42677 84 aaKnown RBP10.88□□□□□ -0.67
GABPB1-208ENST00000558970 GUCA1AP43080 201 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-208ENST00000558970 KIR2DL3P43628 341 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 AQP4P55087 323 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 SH3BGRP55822 239 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-208ENST00000558970 CDC42P60953 191 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 PPA1Q15181 289 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 TAB1Q15750 504 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 SP5Q6BEB4 398 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-208ENST00000558970 OR7E24Q6IFN5 339 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 DNM1P34Q6PK57 102 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 UGT2A3Q6UWM9 527 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 B3GLCTQ6Y288 498 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 SKA3Q8IX90 412 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 SLC22A24Q8N4F4 322 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 PACRGLQ8N7B6 248 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF555Q8NEP9 628 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 FNDC8Q8TC99 324 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 BCL2L2Q92843 193 aaPredicted RBP10.88□□□□□ -0.67
GABPB1-208ENST00000558970 UBE2FQ969M7 185 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 HDHD5Q9BXW7 423 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 PRRG3Q9BZD7 231 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 SLC17A5Q9NRA2 495 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 RASSF1Q9NS23 344 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 FAM118AQ9NWS6 357 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 IMPAD1Q9NX62 359 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 NDRG3Q9UGV2 375 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 POLR1DQ9Y2S0 133 aa10.88□□□□□ -0.67
GABPB1-208ENST00000558970 IGLV1-36A0A0B4J1U3 117 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 LOC100130705A0A1B0GUX0 176 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 M0R1B8 84 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 FARS2O95363 451 aaKnown RBP10.87□□□□□ -0.67
GABPB1-208ENST00000558970 THBDP07204 575 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 OR8G3PP0DMU2 310 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 GGT2P36268 569 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 PCYT1AP49585 367 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 ZNF83P51522 516 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 SORDQ00796 357 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 APOFQ13790 326 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 IZUMO2Q6UXV1 221 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 SLC16A14Q7RTX9 510 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 GLB1L2Q8IW92 636 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 DMRTC2Q8IXT2 367 aaPredicted RBP10.87□□□□□ -0.67
GABPB1-208ENST00000558970 WDR31Q8NA23 367 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 C1orf162Q8NEQ5 155 aaPredicted RBP10.87□□□□□ -0.67
GABPB1-208ENST00000558970 OR2T4Q8NH00 348 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 FGFBP3Q8TAT2 258 aa10.87□□□□□ -0.67
GABPB1-208ENST00000558970 NABP1Q96AH0 204 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms