RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SFXN3Q9BWM7 321 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 MRPS26Q9BYN8 205 aaKnown RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 NELFAQ9H3P2 528 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 GPR35Q9HC97 309 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 CHCHD3Q9NX63 227 aaKnown RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 UPB1Q9UBR1 384 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 MALT1Q9UDY8 824 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 SCOCQ9UIL1 159 aa13.14□□□□□ -0.31
VPS18-202ENST00000558474 MAP1BP46821 2468 aaKnown RBP13.14□□□□□ -0.31
VPS18-202ENST00000558474 IGKV1D-43A0A0B4J1Z2 117 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 TMCC2O75069 709 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 STSP08842 583 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 CD8BP10966 210 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 ZNF823P16415 610 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 MYL12AP19105 171 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 CTSSP25774 331 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 CAPZA2P47755 286 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 ENTPD1P49961 510 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 ETFDHQ16134 617 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 TFAP2EQ6VUC0 442 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 ZNF454Q8N9F8 522 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 OR51L1Q8NGJ5 315 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 FCGR1BQ92637 280 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 RBM24Q9BX46 236 aaKnown RBP13.13□□□□□ -0.31
VPS18-202ENST00000558474 RERGLQ9H628 205 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 CRLF2Q9HC73 371 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 SLC7A10Q9NS82 523 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 ERVK-18Q9QC07 812 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 UGT2A1Q9Y4X1 527 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 COMMD3-BMI1R4GMX3 469 aa13.13□□□□□ -0.31
VPS18-202ENST00000558474 TLN1Q9Y490 2541 aaKnown RBP13.12□□□□□ -0.31
VPS18-202ENST00000558474 BOD1L1Q8NFC6 3051 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 TMEM129A0AVI4 362 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 FAM171A2A8MVW0 826 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
VPS18-202ENST00000558474 TNFSF13O75888 250 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 TOXO94900 526 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 HTR1AP08908 422 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 MPGP29372 298 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 OPRM1P35372 400 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 CA7P43166 264 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 ROR2Q01974 943 aaKnown RBP13.12□□□□□ -0.31
VPS18-202ENST00000558474 IRF3Q14653 427 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 TBCEQ15813 527 aaPredicted RBP13.12□□□□□ -0.31
VPS18-202ENST00000558474 CDC20BQ86Y33 519 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 ERI1Q8IV48 349 aaKnown RBP13.12□□□□□ -0.31
VPS18-202ENST00000558474 SLC35F2Q8IXU6 374 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 GCNT2Q8N0V5 402 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 SPARTQ8N0X7 666 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 ZNF511Q8NB15 262 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 OR10H5Q8NGA6 315 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 OR4F15Q8NGB8 312 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 NSMAFQ92636 917 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 BOD1Q96IK1 185 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 RHNO1Q9BSD3 238 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 CCDC90BQ9GZT6 254 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 PIGMQ9H3S5 423 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 WDR76Q9H967 626 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 SIAEQ9HAT2 523 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 POLE4Q9NR33 117 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 MRPL22Q9NWU5 206 aaKnown RBP13.12□□□□□ -0.31
VPS18-202ENST00000558474 ZNF629Q9UEG4 869 aaPredicted RBP13.12□□□□□ -0.31
VPS18-202ENST00000558474 ERGIC3Q9Y282 383 aa13.12□□□□□ -0.31
VPS18-202ENST00000558474 SHANK1Q9Y566 2161 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 A0A1W2PPL8 197 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 DAPL1A0PJW8 107 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 ZNF670-ZNF695F2Z2N8 137 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 ZNF593O00488 134 aaPredicted RBP13.11□□□□□ -0.31
VPS18-202ENST00000558474 CLPTM1O96005 669 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 CGAP01215 116 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 TFP02787 698 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 MT-ND2P03891 347 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 MSR1P21757 451 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 C21orf33P30042 268 aaPredicted RBP13.11□□□□□ -0.31
VPS18-202ENST00000558474 ADAM8P78325 824 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 GALEQ14376 348 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 CEACAM16Q2WEN9 425 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 FAM27BQ5VT28 67 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 B3GLCTQ6Y288 498 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 Q6ZT83 130 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 BEND4Q6ZU67 534 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 RHOUQ7L0Q8 258 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 DPPA2Q7Z7J5 298 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 SYT9Q86SS6 491 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 UBE2J2Q8N2K1 259 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 CNEP1R1Q8N9A8 125 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 OTOSQ8NHW6 89 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 HAVCR2Q8TDQ0 301 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 ASB17Q8WXJ9 295 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 C11orf40Q8WZ69 217 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 ALKBH3Q96Q83 286 aaPredicted RBP13.11□□□□□ -0.31
VPS18-202ENST00000558474 DMRTA2Q96SC8 542 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 FOXB1Q99853 325 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 MND1Q9BWT6 205 aa13.11□□□□□ -0.31
VPS18-202ENST00000558474 C12orf49Q9H741 205 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms