RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 KIR2DS3K7RE56 304 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 RFXAPO00287 272 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TP53I11O14683 189 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 EEF1E1O43324 174 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 KCNAB3O43448 404 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MBTPS2O43462 519 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TGOLN2O43493 480 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SLC25A17O43808 307 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 HYAL3O43820 417 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 OR10H2O60403 315 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CREBL2O60519 120 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PRAMEF2O60811 474 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 RDH16O75452 317 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 RP2O75695 350 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SCGNO76038 276 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 NKX2-2O95096 273 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SPDEFO95238 335 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 EPPINO95925 133 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 HPP00738 406 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CEACAM5P06731 702 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 HOXB5P09067 269 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 GIPP09681 153 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SMIM10L1P0DMW3 83 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CD8BP10966 210 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 EPCAMP16422 314 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF19P17023 458 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF25P17030 456 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 RCC1P18754 421 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PSMB1P20618 241 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 HOXA5P20719 270 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CDX1P47902 265 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SLC6A8P48029 635 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 DHPSP49366 369 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PDX1P52945 283 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SLC25A1P53007 311 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SELENOVP59797 346 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 RBX1P62877 108 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MRPS11P82912 194 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 EGR3Q06889 387 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 RASGEF1BQ0VAM2 473 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 FABP9Q0Z7S8 132 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PDZK1IP1Q13113 114 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 NFATC4Q14934 902 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 KIR2DS5Q14953 304 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CDK5R1Q15078 307 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 FCN2Q15485 313 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 OR8G1Q15617 311 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 INPP5JQ15735 1006 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MLF2Q15773 248 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 NKPD1Q17RQ9 610 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PNLIPRP3Q17RR3 467 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF791Q3KP31 576 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ITPRIPL2Q3MIP1 535 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 FAM74A3Q4VXF1 159 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PLAC9Q5JTB6 97 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 EXOSC6Q5RKV6 272 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MRPL2Q5T653 305 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 LEMD1Q68G75 181 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 FCRL6Q6DN72 434 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TANGO2Q6ICL3 276 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 FIGNL1Q6PIW4 674 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF813Q6ZN06 617 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TMEM91Q6ZNR0 172 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 COLCA1Q6ZS62 124 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CHMP1BQ7LBR1 199 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF595Q8IYB9 648 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MMP21Q8N119 569 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MTURNQ8N3F0 131 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 C2orf73Q8N5S3 287 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SIRT6Q8N6T7 355 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF248Q8NDW4 579 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PXT1Q8NFP0 134 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 OR52N4Q8NGI2 321 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 OR51A7Q8NH64 312 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 OR2V1Q8NHB1 315 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TMEM255BQ8WV15 326 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CCDC107Q8WV48 283 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MITD1Q8WV92 249 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CNOT9Q92600 299 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 HOXB13Q92826 284 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 FAM131CQ96AQ9 280 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 UPRTQ96BW1 309 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SMIM12Q96EX1 92 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 PHYHIPLQ96FC7 376 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 C16orf58Q96GQ5 468 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SMIM10Q96HG1 83 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TAAR9Q96RI9 348 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 GFM1Q96RP9 751 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ATP6V0BQ99437 205 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 GPA33Q99795 319 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 MESP1Q9BRJ9 268 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF649Q9BS31 505 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TMEM208Q9BTX3 173 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ZNF426Q9BUY5 554 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 TRMT61BQ9BVS5 477 aaKnown RBP5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SEC11CQ9BY50 192 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 ADGRL4Q9HBW9 690 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 Q9N2J8 555 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 SLC6A20Q9NP91 592 aa5.02□□□□□ -1.61
GABPB1-207ENST00000558335 CLDND1Q9NY35 253 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms