RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 C17orf99Q6UX52 265 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 PATE1Q8WXA2 126 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 C8orf44Q96CB5 159 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 TRMT61AQ96FX7 289 aaKnown RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 SLC39A13Q96H72 371 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 SLC2A8Q9NY64 477 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 FAM208AQ9UK61 1670 aaKnown RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 SHPRHQ149N8 1683 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 GABARAPH6UMI1 98 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 NXPH2O95156 264 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 GABARAPO95166 117 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 EIF4EP06730 217 aaKnown RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 MPGP29372 298 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 PMPCAQ10713 525 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 CATR1Q13166 79 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 AKR7LQ8NHP1 331 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 ADAMTS18Q8TE60 1221 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 RPUSD4Q96CM3 377 aaKnown RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 KLK4Q9Y5K2 254 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 FITM1A5D6W6 292 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 OR5H14A6NHG9 310 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 SHISA7A6NL88 538 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 K7ESM1 405 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 YIF1AO95070 293 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 PDGFBP01127 241 aaPredicted RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 METTL15P1P0C7V9 234 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 F2RP25116 425 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 OR10A3P58181 314 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 COMMD1Q8N668 190 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 PFN4Q8NHR9 129 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 FAM3DQ96BQ1 224 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 A0A096LPE4 126 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 A0A1W2PPZ6 126 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 ZNF749O43361 778 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 ZNF740Q8NDX6 193 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 CPPED1Q9BRF8 314 aaPredicted RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 LMF2Q9BU23 707 aaKnown RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 GSX2Q9BZM3 304 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 BOKQ9UMX3 212 aaPredicted RBP12.85□□□□□ -0.35
SPG11-210ENST00000558319 SYT5O00445 386 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 MTHFD2P13995 350 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 TNFRSF4P43489 277 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 MEP1BQ16820 701 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 ZNF813Q6ZN06 617 aa12.85□□□□□ -0.35
SPG11-210ENST00000558319 MYH1P12882 1939 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 MYH4Q9Y623 1939 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 MRPL19P49406 292 aaKnown RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 HSF1Q00613 529 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 RETREG3Q86VR2 466 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 KLHDC8BQ8IXV7 354 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 SLC39A11Q8N1S5 342 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 SLC38A5Q8WUX1 472 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 RTP4Q96DX8 246 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 HRASLS5Q96KN8 279 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 DHRS4Q9BTZ2 278 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 PRO1933Q9H354 126 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 DDAH2O95865 285 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 EXOSC2Q13868 293 aaKnown RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 C11orf91Q3C1V1 193 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 CCSMST1Q4G0I0 132 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 PKDCCQ504Y2 493 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 ANKRD16Q6P6B7 361 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 PARM1Q6UWI2 310 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 LRRC56Q8IYG6 542 aaPredicted RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 BTF3L4Q96K17 158 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 DUSP23Q9BVJ7 150 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 OR2A25A4D2G3 310 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 RAF1P04049 648 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 HNRNPA3P51991 378 aaKnown RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 LGALS4P56470 323 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 AANATQ16613 207 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 MED25Q71SY5 747 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 HEYLQ9NQ87 328 aaPredicted RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 LOC100289279A0A1B0GTE1 492 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 G3V3Q6 166 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 CHEK1O14757 476 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 LGI1O95970 557 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 TRAPPC2P0DI81 140 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 TRAPPC2BP0DI82 140 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 RPL13AP40429 203 aaKnown RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 GSK3AP49840 483 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 ALKBH1Q13686 389 aaKnown RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.84□□□□□ -0.35
SPG11-210ENST00000558319 KDM4DQ6B0I6 523 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 OR2T2Q6IF00 324 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 PIK3C2AO00443 1686 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 AKR7A3O95154 331 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 UTS2O95399 124 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 ATP1B1P05026 303 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 USF1P22415 310 aaPredicted RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 CRMP1Q14194 572 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 MOB1BQ7L9L4 216 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 TMEM179BQ7Z7N9 219 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 GPR150Q8NGU9 434 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 UBL7Q96S82 380 aaPredicted RBP12.84□□□□□ -0.35
SPG11-210ENST00000558319 ABHD6Q9BV23 337 aa12.84□□□□□ -0.35
SPG11-210ENST00000558319 CT45A6P0DMU7 189 aa12.83□□□□□ -0.36
SPG11-210ENST00000558319 CT45A5P0DMU8 189 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms