RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 TCEAL7Q9BRU2 100 aa4.61□□□□□ -1.67
HMG20A-204ENST00000558288 PCBD2Q9H0N5 130 aa4.61□□□□□ -1.67
HMG20A-204ENST00000558288 SMCO4Q9NRQ5 59 aa4.61□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF346Q9UL40 294 aaKnown RBP4.61□□□□□ -1.67
HMG20A-204ENST00000558288 ACACAQ13085 2346 aa4.61□□□□□ -1.67
HMG20A-204ENST00000558288 CACNA1CQ13936 2221 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 TRAV8-7A0A075B6U6 113 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 METTL21EPA6NDL7 271 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 C4orf51C9J302 202 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 WRBO00258 174 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 GATCO43716 136 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 LILRB5O75023 590 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CLEC3AO75596 197 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CTAG2O75638 210 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CD2P06729 351 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 HNRNPA1P09651 372 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SFTA3P0C7M3 94 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 APEHP13798 732 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 NBL1P41271 181 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 DHPSP49366 369 aaPredicted RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CENPAP49450 140 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 TAS2R19P59542 299 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ACTBP60709 375 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ACTG1P63261 375 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 FOXC1Q12948 553 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ECH1Q13011 328 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 GAS6Q14393 721 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 IRF4Q15306 451 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 TGIF1Q15583 401 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ELAVL1Q15717 326 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ALG10BQ5I7T1 473 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ACER2Q5QJU3 275 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 PARS2Q7L3T8 475 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 OR2L13Q8N349 312 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 GALNT16Q8N428 558 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 BPIFB2Q8N4F0 458 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 C10orf53Q8N6V4 93 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 OR4K14Q8NGD5 310 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 TCTEX1D2Q8WW35 142 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ASB13Q8WXK3 278 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 FOXRED1Q96CU9 486 aaPredicted RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 RASD2Q96D21 266 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CLCC1Q96S66 551 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SDF2Q99470 211 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 FAM83CQ9BQN1 747 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 PAPOLGQ9BWT3 736 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SEC11CQ9BY50 192 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 MFRPQ9BY79 579 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 TPSD1Q9BZJ3 242 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 COMMD4Q9H0A8 199 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 RSPH9Q9H1X1 276 aaPredicted RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 OR52A5Q9H2C5 316 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ARRDC1-AS1Q9H2J1 176 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 RHOFQ9HBH0 211 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ZDHHC4Q9NPG8 344 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 RXFP3Q9NSD7 469 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 FBXO34Q9NWN3 711 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 PCOLCE2Q9UKZ9 415 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CARHSP1Q9Y2V2 147 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 PCYT1BQ9Y5K3 369 aaPredicted RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 INSL5Q9Y5Q6 135 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 DOCK8Q8NF50 2099 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 FAM208BQ5VWN6 2430 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SCN3AQ9NY46 2000 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF292O60281 2723 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CPED1A4D0V7 1026 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 MCIDASD6RGH6 385 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 M0R036 132 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SULT2B1O00204 365 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 LATO43561 262 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 GDF9O60383 454 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CDC40O60508 579 aaKnown RBP eCLIP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SRPX2O60687 465 aaPredicted RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 RNGTTO60942 597 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ALOX12BO75342 701 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 LY86O95711 162 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 CFIP05156 583 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 DBIP07108 87 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 TACSTD2P09758 323 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 C6P13671 934 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 AKR1C4P17516 323 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 RPS27P42677 84 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 F2RL1P55085 397 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 OR2B8PP59922 312 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SNRPNP63162 240 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 EEF1A1P68104 462 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 IL13RA1P78552 427 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 DCDP81605 110 aaKnown RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 TMEM35AQ53FP2 167 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 FAM78AQ5JUQ0 283 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ATPAF1Q5TC12 328 aaPredicted RBP4.6□□□□□ -1.67
HMG20A-204ENST00000558288 LIPNQ5VXI9 398 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 NKAIN2Q5VXU1 208 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 OR10K2Q6IF99 312 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF585AQ6P3V2 769 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 Q6ZS52 159 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 SLC29A4Q7RTT9 530 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 BAP18Q8IXM2 172 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 ZNF619Q8N2I2 560 aa4.6□□□□□ -1.67
HMG20A-204ENST00000558288 DEFB119Q8N690 84 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms