RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 NPAP1Q9NZP6 1156 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 VSX1Q9NZR4 365 aaPredicted RBP9.47□□□□□ -0.89
TPM1-210ENST00000558264 LRP12Q9Y561 859 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 TMEM14AQ9Y6G1 99 aa9.47□□□□□ -0.89
TPM1-210ENST00000558264 UBL3O95164 117 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 GIFP27352 417 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 DPP4P27487 766 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 APOBEC1P41238 236 aaKnown RBP9.46□□□□□ -0.89
TPM1-210ENST00000558264 RGS19P49795 217 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 MRPS15P82914 257 aaKnown RBP9.46□□□□□ -0.89
TPM1-210ENST00000558264 GLO1Q04760 184 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 UBE2NLQ5JXB2 153 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 FAAP20Q6NZ36 180 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 NDUFAF7Q7L592 441 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 DCXRQ7Z4W1 244 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 AGBL5Q8NDL9 886 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 ASB10Q8WXI3 467 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 DDIT4LQ96D03 193 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 SPACA9Q96E40 222 aaPredicted RBP9.46□□□□□ -0.89
TPM1-210ENST00000558264 JSRP1Q96MG2 331 aaPredicted RBP9.46□□□□□ -0.89
TPM1-210ENST00000558264 DCBLD2Q96PD2 775 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 ZCCHC4Q9H5U6 513 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 CHST11Q9NPF2 352 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 CENPMQ9NSP4 180 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 MCUBQ9NWR8 336 aa9.46□□□□□ -0.89
TPM1-210ENST00000558264 C19orf25Q9UFG5 118 aaPredicted RBP9.46□□□□□ -0.89
TPM1-210ENST00000558264 PPIEQ9UNP9 301 aaKnown RBP9.46□□□□□ -0.89
TPM1-210ENST00000558264 TRBV5-5A0A0J9YX44 114 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 LIPT2A6NK58 231 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 A6NL46 340 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 PDCD5O14737 125 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 LMX1BO60663 402 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 CD1AP06126 327 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 KLK3P07288 261 aaPredicted RBP9.46□□□□□ -0.9
TPM1-210ENST00000558264 SYPP08247 313 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 FGF5P12034 268 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 ARSBP15848 533 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 SLC6A1P30531 599 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 IFITM2Q01629 132 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 CAMK2DQ13557 499 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 FAM198BQ6UWH4 519 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 LRRTM1Q86UE6 522 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 ZNF679Q8IYX0 411 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 SLC22A8Q8TCC7 542 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 GPR148Q8TDV2 347 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 SLC39A7Q92504 469 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 ZC3HAV1LQ96H79 300 aaKnown RBP9.46□□□□□ -0.9
TPM1-210ENST00000558264 SLITRK2Q9H156 845 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 NKIRAS2Q9NYR9 191 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 MYEF2Q9P2K5 600 aaKnown RBP9.46□□□□□ -0.9
TPM1-210ENST00000558264 KLK11Q9UBX7 282 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 EMC9Q9Y3B6 208 aa9.46□□□□□ -0.9
TPM1-210ENST00000558264 TMEM221A6NGB7 291 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 TMEM212A6NML5 194 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 ZNF254O75437 659 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 LRFN4Q6PJG9 635 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 TMEM105Q8N8V8 129 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 WDSUB1Q8N9V3 476 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 PLPP7Q8NBV4 271 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 OR4K17Q8NGC6 315 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 MFSD8Q8NHS3 518 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 HAVCR2Q8TDQ0 301 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 MARVELD1Q9BSK0 173 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 ZNF160Q9HCG1 818 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 SERINC1Q9NRX5 453 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 B3GALT1Q9Y5Z6 326 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 ORC5O43913 435 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 KLF7O75840 302 aaPredicted RBP9.45□□□□□ -0.9
TPM1-210ENST00000558264 CER1O95813 267 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 ZNF823P16415 610 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 CDK2P24941 298 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 CDAP32320 146 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 GDNFP39905 211 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 EFNB2P52799 333 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 PLA1AQ53H76 456 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 TMEM255AQ5JRV8 349 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 SFRP4Q6FHJ7 346 aaPredicted RBP9.45□□□□□ -0.9
TPM1-210ENST00000558264 ASPHD2Q6ICH7 369 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 SLC7A5P1Q8MH63 180 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 BEST4Q8NFU0 473 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 SLC26A10Q8NG04 563 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 OR2M3Q8NG83 312 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 OR52I2Q8NH67 350 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 TTC9Q92623 222 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 DACT3Q96B18 629 aaPredicted RBP9.45□□□□□ -0.9
TPM1-210ENST00000558264 GNRHR2Q96P88 292 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 PAQR5Q9NXK6 330 aaPredicted RBP9.45□□□□□ -0.9
TPM1-210ENST00000558264 B3GAT1Q9P2W7 334 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 RCE1Q9Y256 329 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 HS3ST3B1Q9Y662 390 aa9.45□□□□□ -0.9
TPM1-210ENST00000558264 IGHV1-45A0A0A0MS14 117 aa9.44□□□□□ -0.9
TPM1-210ENST00000558264 A0A1W2PPL8 197 aa9.44□□□□□ -0.9
TPM1-210ENST00000558264 CENPXA8MT69 81 aa9.44□□□□□ -0.9
TPM1-210ENST00000558264 NTN3O00634 580 aaPredicted RBP9.44□□□□□ -0.9
TPM1-210ENST00000558264 IGHMP01871 453 aa9.44□□□□□ -0.9
TPM1-210ENST00000558264 CCL3P10147 92 aa9.44□□□□□ -0.9
TPM1-210ENST00000558264 MAPK3P27361 379 aaPredicted RBP9.44□□□□□ -0.9
TPM1-210ENST00000558264 CRABP1P29762 137 aa9.44□□□□□ -0.9
TPM1-210ENST00000558264 MMP15P51511 669 aa9.44□□□□□ -0.9
TPM1-210ENST00000558264 RIDAP52758 137 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms