RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 C10orf107Q8IVU9 208 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 RIMKLAQ8IXN7 391 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CLECL1Q8IZS7 167 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 NATD1Q8N6N6 113 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ZDHHC22Q8N966 263 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CCDC63Q8NA47 563 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 POC5Q8NA72 575 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 XAGE5Q8WWM1 108 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 OIT3Q8WWZ8 545 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 RAB8BQ92930 207 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 YIPF5Q969M3 257 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 MRPL24Q96A35 216 aaKnown RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ROPN1LQ96C74 230 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 MAP6Q96JE9 813 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 PPP3R2Q96LZ3 170 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 C3orf30Q96M34 536 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 DUSP26Q9BV47 211 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 GATA5Q9BWX5 397 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 SUCNR1Q9BXA5 334 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 MS4A7Q9GZW8 240 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CRLF2Q9HC73 371 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 MOV10Q9HCE1 1003 aaKnown RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 POLE3Q9NRF9 147 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF275Q9NSD4 429 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 EXD2Q9NVH0 621 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ERVK13-1Q9NX77 482 aa5.01□□□□□ -1.61
VPS33B-207ENST00000557470 SLC25A10Q9UBX3 287 aaPredicted RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 ZMAT5Q9UDW3 170 aaKnown RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 PAIP2BQ9ULR5 123 aaKnown RBP5.01□□□□□ -1.61
VPS33B-207ENST00000557470 CFAP73A6NFT4 308 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 FAM90A20PA6NIJ5 464 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 J3KTA2 159 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 FAAHO00519 579 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 POLR3GO15318 223 aaPredicted RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 RIPK2O43353 540 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 PPIHO43447 177 aaKnown RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 RP2O75695 350 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 SEC14L2O76054 403 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF432O94892 652 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 OPN1MWP04001 364 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 GRPP07492 148 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 FGF4P08620 206 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 OPN1MW2P0DN77 364 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 OPN1MW3P0DN78 364 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 TROVE2P10155 538 aaKnown RBP eCLIP5□□□□□ -1.61
VPS33B-207ENST00000557470 ACHEP22303 614 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 NR4A1P22736 598 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 CRHR1P34998 444 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 ARR3P36575 388 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 TMEM33P57088 247 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 ARPC4P59998 168 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 HPCAP84074 193 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 MYBPC1Q00872 1141 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 CKAP4Q07065 602 aaKnown RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 FOXL1Q12952 345 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 BNIP2Q12982 314 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 IKZF1Q13422 519 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 PCLAFQ15004 111 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 MAD2L1BPQ15013 274 aaPredicted RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 RCN1Q15293 331 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 WHAMMP3Q1A5X7 153 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 ZNF311Q5JNZ3 666 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 C6orf136Q5SQH8 315 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 PRAMEF8Q5VWM4 474 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 PRAMEF7Q5VXH5 474 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 TMEM225Q6GV28 225 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 OR4F3Q6IEY1 312 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 ZCCHC23Q6ZST2 131 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 ADCK1Q86TW2 530 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 MDP1Q86V88 176 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 LRP11Q86VZ4 500 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 LINC00346Q8IVM7 164 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 RIBC1Q8N443 379 aaPredicted RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 MFSD4AQ8N468 514 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 BPIFB2Q8N4F0 458 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 TEX29Q8N6K0 151 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 LRRC17Q8N6Y2 441 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 FNDC5Q8NAU1 212 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 NOA1Q8NC60 698 aaKnown RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 OR4A15Q8NGL6 344 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 AGR3Q8TD06 166 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 C22orf15Q8WYQ4 148 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 RDH5Q92781 318 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 SYT3Q9BQG1 590 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 C1QTNF5Q9BXJ0 243 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 LINC00470Q9BZP3 86 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 UNKLQ9H9P5 680 aaKnown RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 NRIP3Q9NQ35 241 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 MYEF2Q9P2K5 600 aaKnown RBP5□□□□□ -1.61
VPS33B-207ENST00000557470 FZR1Q9UM11 496 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 CMAHPQ9Y471 501 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 PPIAL4AQ9Y536 164 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 N6AMT1Q9Y5N5 214 aa5□□□□□ -1.61
VPS33B-207ENST00000557470 NBEAL2Q6ZNJ1 2754 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 WNK2Q9Y3S1 2297 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 PRKDCP78527 4128 aaKnown RBP4.99□□□□□ -1.61
VPS33B-207ENST00000557470 A0A0G2JMP0 313 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 A0A0X1KG70 313 aa4.99□□□□□ -1.61
VPS33B-207ENST00000557470 A0A1W2PRV1 198 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms