RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 HSF2Q03933 536 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 RPL18Q07020 188 aaKnown RBP11.94□□□□□ -0.5
SLIRP-210ENST00000557431 HFEQ30201 348 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 PCGF3Q3KNV8 242 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 SLC36A2Q495M3 483 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 ZNF613Q6PF04 617 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 RFPL4BQ6ZWI9 263 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 NANOGNBQ7Z5D8 188 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 PFN4Q8NHR9 129 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 SLC25A40Q8TBP6 338 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 ASB10Q8WXI3 467 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 JMJD8Q96S16 334 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 DCLRE1CQ96SD1 692 aaKnown RBP11.94□□□□□ -0.5
SLIRP-210ENST00000557431 PRSS27Q9BQR3 290 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 MEPEQ9NQ76 525 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-210ENST00000557431 MMP26Q9NRE1 261 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 SLCO1C1Q9NYB5 712 aa11.94□□□□□ -0.5
SLIRP-210ENST00000557431 SOX21Q9Y651 276 aaPredicted RBP11.94□□□□□ -0.5
SLIRP-210ENST00000557431 LOC100509620A0A075B734 347 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 SLC22A23A1A5C7 686 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 EVPLLA8MZ36 301 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 MCIDASD6RGH6 385 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 TRMUO75648 421 aaKnown RBP11.93□□□□□ -0.5
SLIRP-210ENST00000557431 IGHG1P01857 330 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 ASAH2BP0C7U1 165 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 FUT1P19526 365 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 CD247P20963 164 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 PPIBP23284 216 aaKnown RBP11.93□□□□□ -0.5
SLIRP-210ENST00000557431 LIMS1P48059 325 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 UGT2B15P54855 530 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 SEC61A1P61619 476 aaKnown RBP11.93□□□□□ -0.5
SLIRP-210ENST00000557431 ERVK-25P63136 954 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 TEKQ02763 1124 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 PLP2Q04941 152 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 CYP51A1Q16850 503 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 RUNDC3AQ59EK9 446 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 TTMPQ5BVD1 217 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 SWT1Q5T5J6 900 aaKnown RBP11.93□□□□□ -0.5
SLIRP-210ENST00000557431 DLEU7Q6UYE1 221 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 JAZF1Q86VZ6 243 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 CLDN22Q8N7P3 220 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 MOSPD2Q8NHP6 518 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 NSMAFQ92636 917 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 RAB1CQ92928 201 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 DVL3Q92997 716 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-210ENST00000557431 ELMOD3Q96FG2 381 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 C1orf147Q96MC9 270 aaPredicted RBP11.93□□□□□ -0.5
SLIRP-210ENST00000557431 BCL2L14Q9BZR8 327 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 OR2J1Q9GZK6 312 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 MSL2Q9HCI7 577 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 NKIRAS2Q9NYR9 191 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 GPR160Q9UJ42 338 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 UGT2A1Q9Y4X1 527 aa11.93□□□□□ -0.5
SLIRP-210ENST00000557431 IGHV3OR16-10A0A075B7F0 116 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 C5orf49A4QMS7 147 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 UBOX5O94941 541 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 IGHV3-13P01766 116 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 STOMP27105 288 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 AQP2P41181 271 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 MRPL19P49406 292 aaKnown RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 MMP15P51511 669 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 ZNF84P51523 738 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 SGCAQ16586 387 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 HIST3H3Q16695 136 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 DHDDSQ86SQ9 333 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 NKAIN4Q8IVV8 208 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 BHLHE22Q8NFJ8 381 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 OR1J2Q8NGS2 313 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 HDAC2Q92769 488 aaKnown RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 NABP1Q96AH0 204 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 TAMM41Q96BW9 452 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 THOC1Q96FV9 657 aaKnown RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 MARS2Q96GW9 593 aaKnown RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 TIMD4Q96H15 378 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 ZNF48Q96MX3 618 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 POFUT1Q9H488 388 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 NPHS2Q9NP85 383 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 CCNB1IP1Q9NPC3 277 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 DDX28Q9NUL7 540 aaKnown RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 ZNF69Q9UC07 566 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 LEF1Q9UJU2 399 aaPredicted RBP11.92□□□□□ -0.5
SLIRP-210ENST00000557431 ZNF229Q9UJW7 825 aa11.92□□□□□ -0.5
SLIRP-210ENST00000557431 TRAPPC13A5PLN9 417 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 DNAJC9-AS1A6NH13 148 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 HMGB1P1B2RPK0 211 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-210ENST00000557431 TRAPPC2LH3BP13 241 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 J3QLI3 93 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 PIP5K1CO60331 668 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 FMO6PO60774 539 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 NGFP01138 241 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 HIST1H2ABP04908 130 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 HKR1P10072 659 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 ACADSP16219 412 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 GCH1P30793 250 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 TOP3AQ13472 1001 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-210ENST00000557431 KLF17Q5JT82 389 aaPredicted RBP11.91□□□□□ -0.5
SLIRP-210ENST00000557431 HIST3H2AQ7L7L0 130 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 C11orf65Q8NCR3 313 aa11.91□□□□□ -0.5
SLIRP-210ENST00000557431 DEFB108BQ8NET1 73 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms