RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 NEFHP12036 1026 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 TCP1P17987 556 aaKnown RBP10.3□□□□□ -0.76
PSEN1-220ENST00000557037 EPHA3P29320 983 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 ARRB2P32121 409 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 SERPINB9P50453 376 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 HSF2Q03933 536 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 GNA13Q14344 377 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 PGS1Q32NB8 556 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 SLC36A2Q495M3 483 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 SLC16A14Q7RTX9 510 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 NDUFA11Q86Y39 141 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 ZNF440Q8IYI8 595 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 HIPK4Q8NE63 616 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 OR4C13Q8NGP0 309 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 ABHD4Q8TB40 342 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 PAFAH2Q99487 392 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 CITED2Q99967 270 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-220ENST00000557037 C1orf50Q9BV19 199 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 SLC38A1Q9H2H9 487 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 A4GALTQ9NPC4 353 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 NOP53Q9NZM5 478 aaKnown RBP10.3□□□□□ -0.76
PSEN1-220ENST00000557037 ZNRD1Q9P1U0 126 aa10.3□□□□□ -0.76
PSEN1-220ENST00000557037 EIF3KQ9UBQ5 218 aaKnown RBP10.3□□□□□ -0.76
PSEN1-220ENST00000557037 TMEM114B3SHH9 223 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 C1QCP02747 245 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 OPN1SWP03999 348 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 LYL1P12980 280 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 CDC25BP30305 580 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 KIR2DS4P43632 304 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 PPP1CBP62140 327 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 PABPC1L2AQ5JQF8 200 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 CFAP157Q5JU67 520 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 METTL11BQ5VVY1 283 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 C11orf88Q6PI97 169 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 ZDHHC24Q6UX98 284 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 NHLRC1Q6VVB1 395 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 ZNF836Q6ZNA1 936 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 Q6ZR03 302 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 FRMD7Q6ZUT3 714 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 VRK2Q86Y07 508 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 PTOV1Q86YD1 416 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 NATD1Q8N6N6 113 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 SPERTQ8NA61 448 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 OR4A15Q8NGL6 344 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 OR2T6Q8NHC8 308 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 C10orf82Q8WW14 230 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 OR2V2Q96R30 315 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 ASCL2Q99929 193 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 GCM1Q9NP62 436 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 PALMDQ9NP74 551 aa10.29□□□□□ -0.76
PSEN1-220ENST00000557037 CGGBP1Q9UFW8 167 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-220ENST00000557037 IGHV3-64DA0A0J9YX35 117 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 A0A1W2PRX2 142 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 C5orf49A4QMS7 147 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 CDHR4A6H8M9 788 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 PHYHO14832 338 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 AZIN1O14977 448 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 DBIP07108 87 aaKnown RBP10.28□□□□□ -0.76
PSEN1-220ENST00000557037 FBP1P09467 338 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 RPS4Y1P22090 263 aaKnown RBP10.28□□□□□ -0.76
PSEN1-220ENST00000557037 STOMP27105 288 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 PHBP35232 272 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 CRATP43155 626 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 BIDP55957 195 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 HOXC5Q00444 222 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 PRB3Q04118 309 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-220ENST00000557037 PSG7Q13046 419 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 ZNF404Q494X3 552 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 NKAPLQ5M9Q1 402 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 OR4F3Q6IEY1 312 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 LRFN4Q6PJG9 635 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 ZNF841Q6ZN19 808 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 LRRC18Q8N456 261 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 CLPTM1LQ96KA5 538 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 TECTBQ96PL2 329 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 SIRPDQ9H106 197 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 GLTPQ9NZD2 209 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 NINJ2Q9NZG7 142 aa10.28□□□□□ -0.76
PSEN1-220ENST00000557037 NKX1-2Q9UD57 310 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-220ENST00000557037 LOC100509620A0A075B734 347 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 A0A087WUJ7 227 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 A0A1W2PRD5 423 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 A0A1W2PRF3 423 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 A0A1W2PRM7 423 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 H3BQF6 201 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 HMGN4O00479 90 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 NPHS1O60500 1241 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 FZD7O75084 574 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 ENTPD5O75356 428 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 CPSF4O95639 269 aaKnown RBP10.27□□□□□ -0.77
PSEN1-220ENST00000557037 ARF6P62330 175 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 EGFEM1PQ0D2K5 195 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 LY6EQ16553 131 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 FAM69AQ5T7M9 428 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 ZFAND6Q6FIF0 208 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 ANKRD46Q86W74 232 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 CALHM3Q86XJ0 350 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 CLIP4Q8N3C7 705 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 ADPRHL1Q8NDY3 354 aa10.27□□□□□ -0.77
PSEN1-220ENST00000557037 C19orf18Q8NEA5 215 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms