RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 IL20Q9NYY1 176 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 TEX15Q9BXT5 2789 aa9.28□□□□□ -0.92
LINC00239-201ENST00000556973 ALPK2Q86TB3 2170 aa9.27□□□□□ -0.92
LINC00239-201ENST00000556973 SOCS2O14508 198 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 FKBP6O75344 327 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 SERPINA5P05154 406 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 BMP4P12644 408 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF35P13682 527 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 GSTM3P21266 225 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 CDAP32320 146 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 GIPRP48546 466 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 CBX1P83916 185 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 COX10Q12887 443 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 PPP1R8Q12972 351 aaKnown RBP9.27□□□□□ -0.93
LINC00239-201ENST00000556973 KRR1Q13601 381 aaKnown RBP9.27□□□□□ -0.93
LINC00239-201ENST00000556973 RAB39AQ14964 217 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 PRSS57Q6UWY2 283 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 B3GLCTQ6Y288 498 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF620Q6ZNG0 422 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 FOXL2NBQ6ZUU3 175 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 DTX2Q86UW9 622 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 MYPOPQ86VE0 399 aaPredicted RBP9.27□□□□□ -0.93
LINC00239-201ENST00000556973 AQP11Q8NBQ7 271 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 NUP37Q8NFH4 326 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 FGFBP3Q8TAT2 258 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 FANK1Q8TC84 345 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 GIPC3Q8TF64 312 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 NABP1Q96AH0 204 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 RASD2Q96D21 266 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 SAMD8Q96LT4 415 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 IFT27Q9BW83 186 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 DGCR6LQ9BY27 220 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 C1orf198Q9H425 327 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 NOX3Q9HBY0 568 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 CCNB1IP1Q9NPC3 277 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 CA10Q9NS85 328 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 CBLN4Q9NTU7 201 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 VNN3Q9NY84 501 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 VSX1Q9NZR4 365 aaPredicted RBP9.27□□□□□ -0.93
LINC00239-201ENST00000556973 DNAJB9Q9UBS3 223 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 SPEF1Q9Y4P9 236 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 ABCA4P78363 2273 aa9.27□□□□□ -0.93
LINC00239-201ENST00000556973 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 IQCMA0A1B0GVH7 501 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 ARRDC5A6NEK1 342 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 H7C1C5 153 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 EBAG9O00559 213 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 SLC16A7O60669 478 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 PPP1R3DO95685 299 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 CST2P09228 141 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 MMP7P09237 267 aaPredicted RBP9.26□□□□□ -0.93
LINC00239-201ENST00000556973 NR4A1P22736 598 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 NOS3P29474 1203 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 CRABP1P29762 137 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 CDKN2AP42771 156 aaKnown RBP9.26□□□□□ -0.93
LINC00239-201ENST00000556973 PTH2RP49190 550 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 ARHGDIAP52565 204 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 PCBD1P61457 104 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 LCN6P62502 163 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 ADAM8P78325 824 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 HGFACQ04756 655 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 PLP2Q04941 152 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 ETFDHQ16134 617 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 RASSF6Q6ZTQ3 369 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 CCDC121Q6ZUS5 278 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 ASRGL1Q7L266 308 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 SYT9Q86SS6 491 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 OR52L1Q8NGH7 329 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 OR1J2Q8NGS2 313 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 HTRA1Q92743 480 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 GTPBP3Q969Y2 492 aaKnown RBP9.26□□□□□ -0.93
LINC00239-201ENST00000556973 SLCO4A1Q96BD0 722 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 PERPQ96FX8 193 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 SNX18Q96RF0 628 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 FEVQ99581 238 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 NUAK2Q9H093 628 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 EGLN3Q9H6Z9 239 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 CDH10Q9Y6N8 788 aa9.26□□□□□ -0.93
LINC00239-201ENST00000556973 NAV2Q8IVL1 2488 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 A0A1W2PPL8 197 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 C12orf71A8MTZ7 269 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 E2F6O75461 281 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 KHDRBS3O75525 346 aaKnown RBP9.25□□□□□ -0.93
LINC00239-201ENST00000556973 RENP00797 406 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 HIST1H1CP16403 213 aaKnown RBP9.25□□□□□ -0.93
LINC00239-201ENST00000556973 CTLA4P16410 223 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 MSR1P21757 451 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 LAP3P28838 519 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 SERPINF1P36955 418 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 GALK2Q01415 458 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 DAG1Q14118 895 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 C1orf146Q5VVC0 180 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 C11orf71Q6IPW1 123 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 DNM1P34Q6PK57 102 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 CD300LDQ6UXZ3 194 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 PTCHD4Q6ZW05 846 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 JAZF1Q86VZ6 243 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 TGIF2LYQ8IUE0 185 aa9.25□□□□□ -0.93
LINC00239-201ENST00000556973 ZNF584Q8IVC4 421 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms