RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 IL1RAPQ9NPH3 570 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 ACTR3BQ9P1U1 418 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 IL20RAQ9UHF4 553 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 FBXL3Q9UKT7 428 aa17.7■□□□□ 0.42
VTI1B-205ENST00000555543 TMEM129A0AVI4 362 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 A6NIZ1 184 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 GADD45GO95257 159 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 BMP4P12644 408 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 NR2C1P13056 603 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 EFNA4P52798 201 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 RAP1BP61224 184 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 RAP1AP62834 184 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 SLC36A2Q495M3 483 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 TMEM53Q6P2H8 277 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 ZDHHC21Q8IVQ6 265 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 MCUR1Q96AQ8 359 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 RBP7Q96R05 134 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 REG4Q9BYZ8 158 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 RNF121Q9H920 327 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 SIAEQ9HAT2 523 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 CR1P17927 2039 aa17.69■□□□□ 0.42
VTI1B-205ENST00000555543 FN1P02751 2386 aaKnown RBP17.68■□□□□ 0.42
VTI1B-205ENST00000555543 TCRBV5S2A0A599 114 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 NDUFB2O95178 105 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 CCL2P13500 99 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 RRM2P31350 389 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 KRTAP1-1Q07627 177 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 SGCAQ16586 387 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 THEM4Q5T1C6 240 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 DPPA2Q7Z7J5 298 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 ZER1Q7Z7L7 766 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 SLC30A7Q8NEW0 376 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 OR10H5Q8NGA6 315 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 RASD2Q96D21 266 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 ZNF570Q96NI8 536 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 GPX7Q96SL4 187 aaPredicted RBP17.68■□□□□ 0.42
VTI1B-205ENST00000555543 NRIP3Q9NQ35 241 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 GRHPRQ9UBQ7 328 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 AURKCQ9UQB9 309 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 NAV3Q8IVL0 2385 aa17.68■□□□□ 0.42
VTI1B-205ENST00000555543 A0A096LNT2 108 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 TEX13CA0A0J9YWL9 993 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 UNC119BA6NIH7 251 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 FAM171A2A8MVW0 826 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 MGRN1O60291 552 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 IGFBP1P08833 259 aaPredicted RBP17.67■□□□□ 0.42
VTI1B-205ENST00000555543 PPOXP50336 477 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 SMIM11AP58511 58 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 MS4A2Q01362 244 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 GABPB1Q06547 395 aaPredicted RBP17.67■□□□□ 0.42
VTI1B-205ENST00000555543 CLEC2AQ6UVW9 174 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 FOXL2NBQ6ZUU3 175 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 ARHGAP24Q8N264 748 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 FNDC8Q8TC99 324 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 DOK1Q99704 481 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 VRK1Q99986 396 aaPredicted RBP17.67■□□□□ 0.42
VTI1B-205ENST00000555543 MRPL37Q9BZE1 423 aaKnown RBP17.67■□□□□ 0.42
VTI1B-205ENST00000555543 TAS2R1Q9NYW7 299 aa17.67■□□□□ 0.42
VTI1B-205ENST00000555543 SLC22A23A1A5C7 686 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 IMPA2O14732 288 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 F12P00748 615 aaPredicted RBP17.66■□□□□ 0.42
VTI1B-205ENST00000555543 SCG5P05408 212 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 ZNF32P17041 273 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 HOXB4P17483 251 aaPredicted RBP17.66■□□□□ 0.42
VTI1B-205ENST00000555543 GALK2Q01415 458 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 KRR1Q13601 381 aaKnown RBP17.66■□□□□ 0.42
VTI1B-205ENST00000555543 PABPC1L2AQ5JQF8 200 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 FAM27BQ5VT28 67 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 LCN8Q6JVE9 175 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 ZCCHC24Q8N2G6 241 aaKnown RBP17.66■□□□□ 0.42
VTI1B-205ENST00000555543 CPEB3Q8NE35 698 aaKnown RBP17.66■□□□□ 0.42
VTI1B-205ENST00000555543 BCAS4Q8TDM0 211 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 MRPL24Q96A35 216 aaKnown RBP17.66■□□□□ 0.42
VTI1B-205ENST00000555543 CLPTM1LQ96KA5 538 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 KRCC1Q9NPI7 259 aaPredicted RBP17.66■□□□□ 0.42
VTI1B-205ENST00000555543 SLC7A8Q9UHI5 535 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 FZR1Q9UM11 496 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 CMAHPQ9Y471 501 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 SPEF1Q9Y4P9 236 aa17.66■□□□□ 0.42
VTI1B-205ENST00000555543 A0A1W2PPL8 197 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 PRSS37A4D1T9 235 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 OR10H3O60404 316 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 APEX1P27695 318 aaKnown RBP17.65■□□□□ 0.42
VTI1B-205ENST00000555543 LAP3P28838 519 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 SDHAP31040 664 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 GLRXP35754 106 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 MAGEA2P43356 314 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 TRIM25Q14258 630 aaKnown RBP17.65■□□□□ 0.42
VTI1B-205ENST00000555543 MTX3Q5HYI7 312 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 LRP11Q86VZ4 500 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 FANK1Q8TC84 345 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 CCDC124Q96CT7 223 aaKnown RBP17.65■□□□□ 0.42
VTI1B-205ENST00000555543 RHNO1Q9BSD3 238 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 NDEL1Q9GZM8 345 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 MUC13Q9H3R2 512 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 CCNB1IP1Q9NPC3 277 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 MYEF2Q9P2K5 600 aaKnown RBP17.65■□□□□ 0.42
VTI1B-205ENST00000555543 PRPF19Q9UMS4 504 aaKnown RBP17.65■□□□□ 0.42
VTI1B-205ENST00000555543 IER3IP1Q9Y5U9 82 aa17.65■□□□□ 0.42
VTI1B-205ENST00000555543 ANK3Q12955 4377 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 341.2 ms