RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 HLA-DQA2P01906 255 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 LCKP06239 509 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 CSNK1A1P48729 337 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 CSNK2BP67870 215 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 RAB40BQ12829 278 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TSPO2Q5TGU0 170 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 PRSS48Q7RTY5 328 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 OR10H4Q8NGA5 316 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 OR6N1Q8NGY5 312 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 MBD3L2Q8NHZ7 208 aaPredicted RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 MYDGFQ969H8 173 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TMIGD2Q96BF3 282 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TMEM80Q96HE8 168 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 ADAD1Q96M93 576 aaKnown RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 SNX18Q96RF0 628 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 ZNF649Q9BS31 505 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 SLC7A10Q9NS82 523 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 MRPS18AQ9NVS2 196 aaKnown RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 GLTPQ9NZD2 209 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 EXOGQ9Y2C4 368 aaKnown RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 FKBP7Q9Y680 259 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TENM4Q6N022 2769 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 UBR5O95071 2799 aaPredicted RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 A0A0G2JNJ9 132 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 A0A1W2PPL8 197 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 SNTNA6NMZ2 147 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 C12orf71A8MTZ7 269 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 PRR32B1ATL7 298 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 PRRG2O14669 202 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 WDR1O75083 606 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 INMTO95050 263 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 RAB36O95755 333 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 WNT11O96014 354 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 YES1P07947 543 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 LIMS3P0CW19 117 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 LIMS4P0CW20 117 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 BLMHQ13867 455 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 GGTLC2Q14390 218 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 OR2G6Q5TZ20 316 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 C9orf135Q5VTT2 229 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 BTLAQ7Z6A9 289 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TIGD4Q8IY51 512 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 C20orf196Q8IYI0 205 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 CNEP1R1Q8N9A8 125 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 WNT2BQ93097 391 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 TMEM54Q969K7 222 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 OR5M11Q96RB7 305 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 CNN2Q99439 309 aaKnown RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 ACOT13Q9NPJ3 140 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 Q9UFV3 132 aa9.5□□□□□ -0.89
TDP1-211ENST00000555178 DIMT1Q9UNQ2 313 aaKnown RBP9.5□□□□□ -0.89
TDP1-211ENST00000555178 SPTBN1Q01082 2364 aaKnown RBP9.49□□□□□ -0.89
TDP1-211ENST00000555178 A0A1W2PQL4 384 aaPredicted RBP9.49□□□□□ -0.89
TDP1-211ENST00000555178 PSMD9O00233 223 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 SS18L1O75177 396 aaPredicted RBP9.49□□□□□ -0.89
TDP1-211ENST00000555178 IGHA1P01876 353 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 GAAP10253 952 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 IRF3Q14653 427 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 RNPS1Q15287 305 aaKnown RBP9.49□□□□□ -0.89
TDP1-211ENST00000555178 SLC35D3Q5M8T2 416 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 SLC25A47Q6Q0C1 308 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 SATL1Q86VE3 508 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 MCEMP1Q8IX19 187 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 OR6N2Q8NGY6 317 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 RBP7Q96R05 134 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 DMRTA2Q96SC8 542 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 AMELYQ99218 206 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 RACGAP1Q9H0H5 632 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 FGF20Q9NP95 211 aaPredicted RBP9.49□□□□□ -0.89
TDP1-211ENST00000555178 EMC7Q9NPA0 242 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 CCNB1IP1Q9NPC3 277 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 HAO2Q9NYQ3 351 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 RCE1Q9Y256 329 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 UGT2A1Q9Y4X1 527 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 SNX5Q9Y5X3 404 aa9.49□□□□□ -0.89
TDP1-211ENST00000555178 FIGNL2A6NMB9 653 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 B8ZZF3 427 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 MRPL33O75394 65 aaKnown RBP9.48□□□□□ -0.89
TDP1-211ENST00000555178 CRABP1P29762 137 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 CEACAM8P31997 349 aaPredicted RBP9.48□□□□□ -0.89
TDP1-211ENST00000555178 ZNF85Q03923 595 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 TSC22D1Q15714 1073 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 KLHL22Q53GT1 634 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 THEM4Q5T1C6 240 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 LCN1P1Q5VSP4 162 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 DPY19L4Q7Z388 723 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 FJX1Q86VR8 437 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 SLC35F2Q8IXU6 374 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 SLC26A10Q8NG04 563 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 TMEM45BQ96B21 275 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 STARD4Q96DR4 205 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 ULBP2Q9BZM5 246 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 OPN3Q9H1Y3 402 aaPredicted RBP9.48□□□□□ -0.89
TDP1-211ENST00000555178 TP63Q9H3D4 680 aaPredicted RBP9.48□□□□□ -0.89
TDP1-211ENST00000555178 SEC61A2Q9H9S3 476 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 CRLF2Q9HC73 371 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 KCNG2Q9UJ96 466 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 ZNF724A8MTY0 619 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 SLC43A1O75387 559 aa9.48□□□□□ -0.89
TDP1-211ENST00000555178 KHDRBS3O75525 346 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms