RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 MYF6P23409 242 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 DTYMKP23919 212 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SH3BP2P78314 561 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 NAXDQ8IW45 347 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 OR10R2Q8NGX6 335 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 SLC6A18Q96N87 628 aa6.36□□□□□ -1.39
SYNE2-216ENST00000555002 LOC285095A0A1B0GVY8 99 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PNPP00491 289 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 DLX5P56178 289 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 GFRALQ6UXV0 394 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 HIST2H3AQ71DI3 136 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 DPPA4Q7L190 304 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 EDAQ92838 391 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 MOB1AQ9H8S9 216 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 HES4Q9HCC6 221 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 OR52A1Q9UKL2 312 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PCDHGA9Q9Y5G4 932 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 MYOFQ9NZM1 2061 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 FAM90A27PA6NNH2 459 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 EPHA2P29317 976 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 OPRD1P41143 372 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 AKR1C3P42330 323 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 VEGFBP49765 207 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 DCAF7P61962 342 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 NXNL2Q5VZ03 156 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 STEAP1BQ6NZ63 245 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 GAREM2Q75VX8 874 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 FGF13Q92913 245 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 ATP13A2Q9NQ11 1180 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 INPP5EQ9NRR6 644 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 NFS1Q9Y697 457 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 SIX6O95475 246 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 OPRL1P41146 370 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 KIF26BQ2KJY2 2108 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 RBM12BQ8IXT5 1001 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 ZFP62Q8NB50 900 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 DTD2Q96FN9 168 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PHRF1Q9P1Y6 1649 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 G3V3Q6 166 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 GPR171O14626 319 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 CD1BP29016 333 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PLAURQ03405 335 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 SLC35F3Q8IY50 421 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 ADAMTS6Q9UKP5 1117 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 MEIKINA0A087WXM9 373 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 CSF3P09919 207 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PPIAP62937 165 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 LRRC28Q86X40 367 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 SLC7A6Q92536 515 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 RASD2Q96D21 266 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 ZMAT3Q9HA38 289 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 SLC23A1Q9UHI7 598 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 DOCK11Q5JSL3 2073 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PPP1R2P9O14990 202 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 ERHP84090 104 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 HSF1Q00613 529 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 VWA2Q5GFL6 755 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 FAM78AQ5JUQ0 283 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 BTNL3Q6UXE8 466 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 EXOSC3Q9NQT5 275 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 SLC17A4Q9Y2C5 497 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 COQ4Q9Y3A0 265 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 NME2P1O60361 137 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 GJA4P35212 333 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 CTBSQ01459 385 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 RPE65Q16518 533 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 GLIPR1L1Q6UWM5 242 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PIWIL3Q7Z3Z3 882 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 WDR5BQ86VZ2 330 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 RSRP1Q9BUV0 290 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 VRTNQ9H8Y1 702 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 KCND3Q9UK17 655 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 KIF13AQ9H1H9 1805 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PPIHO43447 177 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 FZD7O75084 574 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 UPK1BO75841 260 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 AKR7A3O95154 331 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 APEX1P27695 318 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 BCL6P41182 706 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PCBP3P57721 371 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 VWA1Q6PCB0 445 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 TFAP2EQ6VUC0 442 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 LILRB1Q8NHL6 650 aaPredicted RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 ANGPTL6Q8NI99 470 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 TAS2R5Q9NYW4 299 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 SLC22A7Q9Y694 548 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 C5orf49A4QMS7 147 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 J3QR89 54 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PHOX2AO14813 284 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 XRCC2O43543 280 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 RFC3P40938 356 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 TATDN3Q17R31 274 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 RFPL4BQ6ZWI9 263 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 PARS2Q7L3T8 475 aaKnown RBP6.35□□□□□ -1.39
SYNE2-216ENST00000555002 GPR119Q8TDV5 335 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 RANBP9Q96S59 729 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 AK3Q9UIJ7 227 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 OSGIN1Q9UJX0 560 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 AUP1Q9Y679 476 aa6.35□□□□□ -1.39
SYNE2-216ENST00000555002 CNMDO75829 334 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms