RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SLC26A10Q8NG04 563 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 OR2T27Q8NH04 317 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 ALKBH3Q96Q83 286 aaPredicted RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 RBM24Q9BX46 236 aaKnown RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 CDCA4Q9BXL8 241 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 C12orf49Q9H741 205 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 SEC61A2Q9H9S3 476 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 CRLF2Q9HC73 371 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 GPR35Q9HC97 309 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 SLC7A10Q9NS82 523 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 ERVK-18Q9QC07 812 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 MALT1Q9UDY8 824 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 PROCRQ9UNN8 238 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 COMMD3-BMI1R4GMX3 469 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 PIEZO2Q9H5I5 2752 aa12.69□□□□□ -0.38
SHOX2-206ENST00000554685 TPRP12270 2363 aaKnown RBP12.69□□□□□ -0.38
SHOX2-206ENST00000554685 IGKV1D-43A0A0B4J1Z2 117 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 TVP23AA6NH52 213 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 E9PLN8 166 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF670-ZNF695F2Z2N8 137 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 IGHA1P01876 353 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 MT-ND2P03891 347 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 MRPL3P09001 348 aaKnown RBP12.68□□□□□ -0.38
SHOX2-206ENST00000554685 GLI4P10075 376 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 GAAP10253 952 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 MSR1P21757 451 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 CTSSP25774 331 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 NAA10P41227 235 aaPredicted RBP12.68□□□□□ -0.38
SHOX2-206ENST00000554685 KIR2DL2P43627 348 aaPredicted RBP12.68□□□□□ -0.38
SHOX2-206ENST00000554685 ENTPD1P49961 510 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 CDH15P55291 814 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 ADAM8P78325 824 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 MRPS34P82930 218 aaKnown RBP12.68□□□□□ -0.38
SHOX2-206ENST00000554685 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 CEACAM16Q2WEN9 425 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 TEX30Q5JUR7 227 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 PHYHD1Q5SRE7 291 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 TFAP2EQ6VUC0 442 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 B3GLCTQ6Y288 498 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 SEM1Q6ZVN7 128 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 ATCAYQ86WG3 371 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 SLC35F2Q8IXU6 374 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 TIGD4Q8IY51 512 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF454Q8N9F8 522 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 OR10H4Q8NGA5 316 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 OR4F15Q8NGB8 312 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 OR6N2Q8NGY6 317 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 ZNRF4Q8WWF5 429 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 FCGR1BQ92637 280 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 SIGLEC11Q96RL6 698 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 VKORC1Q9BQB6 163 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 RHNO1Q9BSD3 238 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 CDADC1Q9BWV3 514 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 NELFAQ9H3P2 528 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 WDR76Q9H967 626 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 TINAGQ9UJW2 476 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 ERGIC3Q9Y282 383 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 POLR1DQ9Y2S0 133 aa12.68□□□□□ -0.38
SHOX2-206ENST00000554685 TRGV8A0A0C4DH27 118 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 DAPL1A0PJW8 107 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 TRIM64CA6NLI5 447 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 C12orf71A8MTZ7 269 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF99A8MXY4 864 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-206ENST00000554685 J3QRE1 110 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 MYL12BO14950 172 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 SELENOFO60613 162 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 APOL3O95236 402 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 FARS2O95363 451 aaKnown RBP12.67□□□□□ -0.38
SHOX2-206ENST00000554685 IL18BPO95998 194 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 CLPTM1O96005 669 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 CD8BP10966 210 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 OPRM1P35372 400 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 CA7P43166 264 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 CAPZA2P47755 286 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 LSM6P62312 80 aaKnown RBP12.67□□□□□ -0.38
SHOX2-206ENST00000554685 TBCEQ15813 527 aaPredicted RBP12.67□□□□□ -0.38
SHOX2-206ENST00000554685 SPARTQ8N0X7 666 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 ASB17Q8WXJ9 295 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 C11orf40Q8WZ69 217 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 FOXB1Q99853 325 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 WACQ9BTA9 647 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 PIGMQ9H3S5 423 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 POLE4Q9NR33 117 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 LAMP5Q9UJQ1 280 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 UGT2A1Q9Y4X1 527 aa12.67□□□□□ -0.38
SHOX2-206ENST00000554685 TLN1Q9Y490 2541 aaKnown RBP12.67□□□□□ -0.38
SHOX2-206ENST00000554685 MAP1BP46821 2468 aaKnown RBP12.67□□□□□ -0.38
SHOX2-206ENST00000554685 ZNF593O00488 134 aaPredicted RBP12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TNFSF13O75888 250 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TOXO94900 526 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 TFP02787 698 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 HTR1AP08908 422 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 SPARCP09486 303 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 SMIM18P0DKX4 95 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 ATP6V1B1P15313 513 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 MPGP29372 298 aa12.66□□□□□ -0.38
SHOX2-206ENST00000554685 C21orf33P30042 268 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms