RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 PRPS1L1P21108 318 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 GCSHP23434 173 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ECHS1P30084 290 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 SLC6A9P48067 706 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 PTDSS1P48651 473 aaKnown RBP4.05□□□□□ -1.76
ATXN3-229ENST00000554672 KLF3P57682 345 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-229ENST00000554672 BPIFB3P59826 476 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 DNAJB13P59910 316 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 KRTAP10-3P60369 221 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 COPZ1P61923 177 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 GNG11P61952 73 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 RPL38P63173 70 aaKnown RBP4.05□□□□□ -1.76
ATXN3-229ENST00000554672 HBA1P69905 142 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 EPS8Q12929 822 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 CAMK2DQ13557 499 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 GNA13Q14344 377 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 TSTQ16762 297 aaKnown RBP4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ALKBH6Q3KRA9 238 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 CFAP157Q5JU67 520 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 C1orf140Q5VVS0 124 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 LIPMQ5VYY2 423 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 FIP1L1Q6UN15 594 aaKnown RBP4.05□□□□□ -1.76
ATXN3-229ENST00000554672 Q6ZNX1 250 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 SNX32Q86XE0 403 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF440Q8IYI8 595 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 KDM8Q8N371 416 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 TMEM86BQ8N661 226 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 OR2T11Q8NH01 316 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 OR5AK3PQ8NH89 298 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 MFSD8Q8NHS3 518 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 KIF18AQ8NI77 898 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF519Q8TB69 540 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 MIPOL1Q8TD10 442 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ROPN1LQ96C74 230 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 KTI12Q96EK9 354 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-229ENST00000554672 LRR1Q96L50 414 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF75AQ96N20 296 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 OXGR1Q96P68 337 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 DUSP26Q9BV47 211 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 MTHFD2LQ9H903 347 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-229ENST00000554672 SAP30LQ9HAJ7 183 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 TCF7L1Q9HCS4 588 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 NOX4Q9NPH5 578 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 C1RLQ9NZP8 487 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 SEC14L4Q9UDX3 406 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 DCDC2Q9UHG0 476 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 POFUT2Q9Y2G5 429 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 CACNG2Q9Y698 323 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 VWFP04275 2813 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 NBEAL2Q6ZNJ1 2754 aa4.05□□□□□ -1.76
ATXN3-229ENST00000554672 HEATR1Q9H583 2144 aaKnown RBP4.04□□□□□ -1.76
ATXN3-229ENST00000554672 RYR3Q15413 4870 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 FTCDNL1E5RQL4 147 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 G3V2L1 256 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 G3V4G9 280 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 M0R3G1 203 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 LSM1O15116 133 aaKnown RBP4.04□□□□□ -1.76
ATXN3-229ENST00000554672 NPIPB7O75200 414 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 AHSA1O95433 338 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 IGLV2-14P01704 120 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 IGHV3-13P01766 116 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 LCKP06239 509 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 FGF4P08620 206 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 CSF1P09603 554 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 SBK2P0C263 348 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 MYZAPP0CAP1 466 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 IGHV4-38-2P0DP08 117 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 MYL2P10916 166 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 PNMTP11086 282 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 IL7RP16871 459 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 DRD4P21917 467 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 CPT2P23786 658 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 CD80P33681 288 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 SOAT1P35610 550 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 RBMXP38159 391 aaKnown RBP4.04□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF81P51508 661 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 ELLP55199 621 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-229ENST00000554672 UCP2P55851 309 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 SCAND1P57086 179 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 RPL15P61313 204 aaKnown RBP4.04□□□□□ -1.76
ATXN3-229ENST00000554672 HPCAP84074 193 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 BNIP2Q12982 314 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 RAB39AQ14964 217 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 FAM189A2Q15884 450 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 C2orf68Q2NKX9 166 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 DEFB112Q30KQ8 113 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 GALNTL6Q49A17 601 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 GPAT3Q53EU6 434 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 TOR2AQ5JU69 321 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 CLEC6AQ6EIG7 209 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 WBP2NLQ6ICG8 309 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 BTNL3Q6UXE8 466 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 LRRN1Q6UXK5 716 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 ZYG11AQ6WRX3 759 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF813Q6ZN06 617 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 FRRS1Q6ZNA5 592 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF620Q6ZNG0 422 aa4.04□□□□□ -1.76
ATXN3-229ENST00000554672 ZNF771Q7L3S4 317 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-229ENST00000554672 NET1Q7Z628 596 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-229ENST00000554672 RNF130Q86XS8 419 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms