RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 RPS6KB2Q9UBS0 482 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 REV1Q9UBZ9 1251 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 BLOC1S6Q9UL45 172 aa9.2□□□□□ -0.94
SHMT2-215ENST00000554656 A0A1B0GWA3 101 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 SLC35F4A4IF30 521 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 ZAR1LA6NP61 321 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 MPZL2O60487 215 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 IFNA2P01563 188 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 THY1P04216 161 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 CCDC159P0C7I6 412 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 APOBEC3AP31941 199 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-215ENST00000554656 SELENOPP49908 381 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 MAP2K6P52564 334 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 PRPS1P60891 318 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 ISL1P61371 349 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 CSNK2BP67870 215 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 TUBA1BP68363 451 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 TUBA4AP68366 448 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 IL1RL1Q01638 556 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 TGFBR3Q03167 851 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 PRKCDQ05655 676 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 KRTAP24-1Q3LI83 254 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 TBRG1Q3YBR2 411 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 WBP2NLQ6ICG8 309 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 RPL13AP3Q6NVV1 102 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 TUBA1AQ71U36 451 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 GPAT4Q86UL3 456 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 MYPOPQ86VE0 399 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-215ENST00000554656 NKAIN4Q8IVV8 208 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 CADM2Q8N3J6 435 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 POMGNT2Q8NAT1 580 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 OR1K1Q8NGR3 316 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM239Q8WW34 195 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 C3orf49Q96BT1 292 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 FBXO17Q96EF6 278 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 ALKBH3Q96Q83 286 aaPredicted RBP9.19□□□□□ -0.94
SHMT2-215ENST00000554656 PTDSS2Q9BVG9 487 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 SF3B5Q9BWJ5 86 aaKnown RBP9.19□□□□□ -0.94
SHMT2-215ENST00000554656 SLC19A3Q9BZV2 496 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM160Q9NX00 188 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 CDC42EP3Q9UKI2 254 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 SLC7A7Q9UM01 511 aa9.19□□□□□ -0.94
SHMT2-215ENST00000554656 IGHV4-61A0A0C4DH41 118 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 TRIM64CA6NLI5 447 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 FTCDNL1E5RQL4 147 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 MRPS14O60783 128 aaKnown RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 FZD7O75084 574 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 UPK3AO75631 287 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 F12P00748 615 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CSF3P09919 207 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CECR9P0C854 216 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 PNMTP11086 282 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 FUT4P22083 530 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 USF1P22415 310 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CXCR1P25024 350 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CALCRP30988 508 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 POLR2IP36954 125 aaKnown RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 OMPP47874 163 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 GABARAPL2P60520 117 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CDC42P60953 191 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 HOXC5Q00444 222 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 SRSF2Q01130 221 aaKnown RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 EGR4Q05215 589 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CD47Q08722 323 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 ADIPOQQ15848 244 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 ALG10BQ5I7T1 473 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 C6orf141Q5SZD1 244 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 C1orf140Q5VVS0 124 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 SLX4IPQ5VYV7 408 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 IL17RELQ6ZVW7 336 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 TMPRSS11FQ6ZWK6 438 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CREB3L2Q70SY1 520 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CDK20Q8IZL9 346 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 TRUB1Q8WWH5 349 aaKnown RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 BCL2L2Q92843 193 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 SLC38A2Q96QD8 506 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 KCNK17Q96T54 332 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 TMEM43Q9BTV4 400 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 PRR14Q9BWN1 585 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 MRPS26Q9BYN8 205 aaKnown RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 SLC25A19Q9HC21 320 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 CRNNQ9UBG3 495 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-215ENST00000554656 SEC14L4Q9UDX3 406 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 MED31Q9Y3C7 131 aa9.18□□□□□ -0.94
SHMT2-215ENST00000554656 A0A087WUJ7 227 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 A0A087WXM4 84 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 A0A096LPE4 126 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 ARPC4-TTLL3A0A0A6YYG9 625 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 A0A1W2PPZ6 126 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF503-AS2A6NEH8 195 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 A8MVM7 634 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF587BE7ETH6 402 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 ZNF432O94892 652 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 CLIC3O95833 236 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 WNT11O96014 354 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 IGLV1-44P01699 117 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 IGFBP1P08833 259 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-215ENST00000554656 CELA3BP08861 270 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 EPHA2P29317 976 aa9.17□□□□□ -0.94
SHMT2-215ENST00000554656 NR4A2P43354 598 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms