RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 USP9XQ93008 2570 aaPredicted RBP3.47□□□□□ -1.85
CHD8-207ENST00000554384 FRYLO94915 3013 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 IGKV6D-41A0A0C4DH26 115 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 LOC110117498-PIK3R3F6TDL0 507 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 FAM189A1O60320 539 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 CLDN9O95484 217 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 MOSP00540 346 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 PCCAP05165 728 aaPredicted RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 GIPP09681 153 aaPredicted RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 CHTF8P0CG12 524 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 ATP1B2P14415 290 aaPredicted RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 PBLDP30039 288 aaPredicted RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 KIR2DS4P43632 304 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 CRYBB1P53674 252 aaPredicted RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 TAS2R19P59542 299 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 OGDHQ02218 1023 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 DDX39BQ13838 428 aaKnown RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 NRF1Q16656 503 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 RABL6Q3YEC7 729 aaPredicted RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 KCTD21Q4G0X4 260 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 C2orf83Q53S99 150 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 GPR157Q5UAW9 335 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 FKBP1CQ5VVH2 108 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 RNF165Q6ZSG1 346 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 PAQR7Q86WK9 346 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 PIANPQ8IYJ0 282 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 TMEM61Q8N0U2 210 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 Q8N7P7 452 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 OR51S1Q8NGJ8 323 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 MYDGFQ969H8 173 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 GLT1D1Q96MS3 346 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 MS4A4EQ96PG1 132 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 TGS1Q96RS0 853 aaKnown RBP3.46□□□□□ -1.86
CHD8-207ENST00000554384 RASL11BQ9BPW5 248 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 MFSD1Q9H3U5 465 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 METTL7AQ9H8H3 244 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 NMRAL1Q9HBL8 299 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 COX16Q9P0S2 106 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 NEUROG3Q9Y4Z2 214 aa3.46□□□□□ -1.86
CHD8-207ENST00000554384 MROH7Q68CQ1 1323 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 SYNRGQ9UMZ2 1314 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 AK9Q5TCS8 1911 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 PCP4L1A6NKN8 68 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 OR5B21A6NL26 309 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 OR52A4PA6NMU1 304 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 LOC730098B7Z3J9 87 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 KRTAP4-16G5E9R7 235 aaPredicted RBP3.45□□□□□ -1.86
CHD8-207ENST00000554384 AGPAT2O15120 278 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 CNMDO75829 334 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 KLF8O95600 359 aaPredicted RBP3.45□□□□□ -1.86
CHD8-207ENST00000554384 ASGR1P07306 291 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 ZNF17P17021 662 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 CCNE1P24864 410 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 CD1CP29017 333 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 FMO3P31513 532 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 HNRNPH3P31942 346 aaKnown RBP3.45□□□□□ -1.86
CHD8-207ENST00000554384 DLX1P56177 255 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 CCNA1P78396 465 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 ASPHQ12797 758 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 ATP6AP1Q15904 470 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 CTRB2Q6GPI1 263 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 ACP7Q6ZNF0 438 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 ZNF546Q86UE3 836 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 THOC6Q86W42 341 aaKnown RBP3.45□□□□□ -1.86
CHD8-207ENST00000554384 SLC22A9Q8IVM8 553 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 OR6C4Q8NGE1 309 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 UCN3Q969E3 161 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 MBOAT4Q96T53 435 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 SLC25A22Q9H936 323 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 QPCTLQ9NXS2 382 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 SUN2Q9UH99 717 aa3.45□□□□□ -1.86
CHD8-207ENST00000554384 PRG3Q9Y2Y8 225 aaPredicted RBP3.45□□□□□ -1.86
CHD8-207ENST00000554384 PHF3Q92576 2039 aaKnown RBP3.44□□□□□ -1.86
CHD8-207ENST00000554384 GBF1Q92538 1859 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 COL4A4P53420 1690 aaPredicted RBP3.44□□□□□ -1.86
CHD8-207ENST00000554384 SYNJ2BP-COX16A0A087WUM0 186 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 A0A1W2PPV9 198 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 GJE1A6NN92 205 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 SNX4O95219 450 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 C1orf105O95561 183 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 INSP01308 110 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 MMP1P03956 469 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 UBTFL1P0CB47 393 aaPredicted RBP3.44□□□□□ -1.86
CHD8-207ENST00000554384 ABOP16442 354 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 IL12AP29459 219 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 GLP1RP43220 463 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 DEFB103AP81534 67 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 HMGN5P82970 282 aaKnown RBP3.44□□□□□ -1.86
CHD8-207ENST00000554384 ACVR1Q04771 509 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 SCRN3Q0VDG4 424 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 IMMTQ16891 758 aaKnown RBP3.44□□□□□ -1.86
CHD8-207ENST00000554384 BOLA3Q53S33 107 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 CASC10Q5T4H9 136 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 N4BP2L1Q5TBK1 243 aaPredicted RBP3.44□□□□□ -1.86
CHD8-207ENST00000554384 LRRC31Q6UY01 552 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 NUDCD3Q8IVD9 361 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 TPRX1Q8N7U7 411 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 FAM83FQ8NEG4 500 aaPredicted RBP3.44□□□□□ -1.86
CHD8-207ENST00000554384 PHOSPHO2Q8TCD6 241 aa3.44□□□□□ -1.86
CHD8-207ENST00000554384 RNF138Q8WVD3 245 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms