RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ASB10Q8WXI3 467 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 NRBF2Q96F24 287 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 MYCBPQ99417 103 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-211ENST00000554310 YTHDF1Q9BYJ9 559 aaKnown RBP11.36□□□□□ -0.59
SHMT2-211ENST00000554310 RHCGQ9UBD6 479 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 FBXL3Q9UKT7 428 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 ENPP4Q9Y6X5 453 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 ZANQ9Y493 2812 aa11.36□□□□□ -0.59
SHMT2-211ENST00000554310 SMIM31A0A1B0GVY4 71 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 ZNF503-AS2A6NEH8 195 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 H7C417 338 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 UBL3O95164 117 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 SNAP29O95721 258 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 CLPTM1O96005 669 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 HLA-HP01893 362 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 SAGP10523 405 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-211ENST00000554310 NR2C1P13056 603 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 APOBEC3AP31941 199 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-211ENST00000554310 RPL5P46777 297 aaKnown RBP11.35□□□□□ -0.59
SHMT2-211ENST00000554310 SLC9A3P48764 834 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 IDH3GP51553 393 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-211ENST00000554310 CLRN1P58418 232 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 PRKCDQ05655 676 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 NPRL3Q12980 569 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 HIST3H3Q16695 136 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 RFX4Q33E94 735 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 NRN1LQ496H8 165 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 ALG10Q5BKT4 473 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 ZNF730Q6ZMV8 503 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 MBOAT2Q6ZWT7 520 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 MDP1Q86V88 176 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 IL17RDQ8NFM7 739 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 OR4F15Q8NGB8 312 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 MOSPD2Q8NHP6 518 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 CYGBQ8WWM9 190 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 CACNG6Q9BXT2 260 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 CA10Q9NS85 328 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 B3GNT2Q9NY97 397 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 FAM32AQ9Y421 112 aaKnown RBP11.35□□□□□ -0.59
SHMT2-211ENST00000554310 CSPG4Q6UVK1 2322 aa11.35□□□□□ -0.59
SHMT2-211ENST00000554310 ARFGEF3Q5TH69 2177 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 A0A087WUU8 490 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 A0A1W2PRQ8 180 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TRIM64A6NGJ6 449 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TRIM64BA6NI03 449 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 VGLL3A8MV65 326 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 FAM171A2A8MVW0 826 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 EFCAB9A8MZ26 197 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 H7C1Q1 480 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 DHHO43323 396 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 E2F6O75461 281 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 RAB36O95755 333 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 IGHV4-39P01824 125 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 IGHMP01871 453 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TFAP2AP05549 437 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 H1F0P07305 194 aaKnown RBP11.34□□□□□ -0.59
SHMT2-211ENST00000554310 CELA3BP08861 270 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 ITGA2P17301 1181 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 RHCEP18577 417 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 ARHGDIAP52565 204 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 LSM11P83369 360 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHMT2-211ENST00000554310 DGCR6Q14129 220 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 IQCCQ4KMZ1 466 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 ARMC4Q5T2S8 1044 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 FOXB2Q5VYV0 432 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TTC23Q5W5X9 447 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 FAM205BPQ63HN1 556 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 LRFN4Q6PJG9 635 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 DPPA2Q7Z7J5 298 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TMEM179BQ7Z7N9 219 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 MYPOPQ86VE0 399 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-211ENST00000554310 CDK20Q8IZL9 346 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 NUP37Q8NFH4 326 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TSPAN14Q8NG11 270 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 C7orf34Q96L11 122 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 MRPL13Q9BYD1 178 aaKnown RBP11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TXNIPQ9H3M7 391 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 ZNF442Q9H7R0 627 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 SEC61A2Q9H9S3 476 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 NMNAT1Q9HAN9 279 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-211ENST00000554310 SMURF2Q9HAU4 748 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TMEM38BQ9NVV0 291 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 NDUFAF4Q9P032 175 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 TMEM5Q9Y2B1 443 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 ZFHX3Q15911 3703 aa11.34□□□□□ -0.59
SHMT2-211ENST00000554310 IGHV2OR16-5A0A0B4J2B6 119 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 TRIM64CA6NLI5 447 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 TRMUO75648 421 aaKnown RBP11.33□□□□□ -0.6
SHMT2-211ENST00000554310 FARS2O95363 451 aaKnown RBP11.33□□□□□ -0.6
SHMT2-211ENST00000554310 QDPRP09417 244 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 GNAO1P09471 354 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 OR8G3PP0DMU2 310 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 CD79AP11912 226 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 MAKP20794 623 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 FUT4P22083 530 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 CALCRP30988 508 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF84P51523 738 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 ZNF133P52736 654 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-211ENST00000554310 RAD23AP54725 363 aa11.33□□□□□ -0.6
SHMT2-211ENST00000554310 SNRPD2P62316 118 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms